RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ZC3H18Q86VM9 953 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 PHF13Q86YI8 300 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ZCCHC9Q8N567 271 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 PHC3Q8NDX5 983 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 NRG4Q8WWG1 115 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ZBED3Q96IU2 234 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 VCPIP1Q96JH7 1222 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 ADAM33Q9BZ11 813 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 SLC9A2Q9UBY0 812 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 DCTN4Q9UJW0 460 aa17.45■□□□□ 0.38
PCDHA1-201ENST00000378133 OCRLQ01968 901 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 CXCL9Q07325 125 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 ZRSR2Q15696 482 aaKnown RBP17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 CEP128Q6ZU80 1094 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 OR5B17Q8NGF7 314 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 FGD4Q96M96 766 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 BTBD10Q9BSF8 475 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 MYOZ2Q9NPC6 264 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 METTL5Q9NRN9 209 aaKnown RBP17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 PARVAQ9NVD7 372 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 SENP1Q9P0U3 644 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 ANKFY1Q9P2R3 1169 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 ZNRF3Q9ULT6 936 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 NUMBLQ9Y6R0 609 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 SCINQ9Y6U3 715 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 CAPN9O14815 690 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 LIASO43766 372 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 KRT36O76013 467 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 GSTA2P09210 222 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 FGFR1P11362 822 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 FASTKD3Q14CZ7 662 aaKnown RBP17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 PDCD2Q16342 344 aaPredicted RBP17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 PLEKHG4Q58EX7 1191 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 XRRA1Q6P2D8 792 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 LVRNQ6Q4G3 990 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 MFSD7Q6UXD7 560 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 CAPN12Q6ZSI9 719 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 TDRPQ86YL5 185 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 CFAP61Q8NHU2 1237 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 IFT43Q96FT9 208 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 TARS2Q9BW92 718 aaKnown RBP17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 PIM2Q9P1W9 311 aa17.44■□□□□ 0.38
PCDHA1-201ENST00000378133 CFAP69A5D8W1 941 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 LRRIQ4A6NIV6 560 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 K7ERI5 159 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 ZWINTO95229 277 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 EGFRP00533 1210 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 PYGLP06737 847 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 NOP14P78316 857 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 SLC34A1Q06495 639 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 KPNB1Q14974 876 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 EMC2Q15006 297 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 ACSBG2Q5FVE4 666 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 SNRNP48Q6IEG0 339 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 LRRC74BQ6ZQY2 392 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 TRIM74Q86UV6 250 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 TRIM73Q86UV7 250 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 ZNF606Q8WXB4 792 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 TRAPPC9Q96Q05 1148 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 A0A1W2PPM1 405 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 H0YCG3 227 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 GSC2O15499 205 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 TROVE2P10155 538 aaKnown RBP eCLIP17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 CETN2P41208 172 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 ARSEP51690 589 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 CACNA2D1P54289 1103 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 NIM1KQ8IY84 436 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 ACSF2Q96CM8 615 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 HAUS1Q96CS2 278 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 SLITRK1Q96PX8 696 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 FOXP3Q9BZS1 431 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 VPS37BQ9H9H4 285 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 IP6K2Q9UHH9 426 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 STYXL1Q9Y6J8 313 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 IVNS1ABPQ9Y6Y0 642 aa17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 MYH9P35579 1960 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-201ENST00000378133 WDR91A4D1P6 747 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 F8VP50 259 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 GYG2O15488 501 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 TYROBPO43914 113 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 HARSP12081 509 aaKnown RBP17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 GPS1Q13098 491 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 RCOR2Q8IZ40 523 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 KLHL23Q8NBE8 558 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 PPFIBP2Q8ND30 876 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 DTX3LQ8TDB6 740 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 TTC25Q96NG3 672 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 MSTO1Q9BUK6 570 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 FBXO40Q9UH90 709 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 DNALI1O14645 258 aaPredicted RBP17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 COQ9O75208 318 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 TBX10O75333 385 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 KRT1P04264 644 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 OVGP1Q12889 678 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 MAPK6Q16659 721 aa17.42■□□□□ 0.38
PCDHA1-201ENST00000378133 XKR3Q5GH77 459 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms