RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ZSWIM2Q8NEG5 633 aa16.96■□□□□ 0.3
RGP1-201ENST00000378078 NSMCE4AQ9NXX6 385 aa16.96■□□□□ 0.3
RGP1-201ENST00000378078 MRPL39Q9NYK5 338 aaKnown RBP16.96■□□□□ 0.3
RGP1-201ENST00000378078 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 CCDC85CA6NKD9 419 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 CSF1RP07333 972 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 ATP6V1B1P15313 513 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 RUNX1T1Q06455 604 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 LAMC2Q13753 1193 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 TTC39BQ5VTQ0 682 aaPredicted RBP16.95■□□□□ 0.3
RGP1-201ENST00000378078 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.95■□□□□ 0.3
RGP1-201ENST00000378078 TUBGCP3Q96CW5 907 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 CELF4Q9BZC1 486 aaKnown RBP16.95■□□□□ 0.3
RGP1-201ENST00000378078 ROGDIQ9GZN7 287 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 RCOR1Q9UKL0 485 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 SPACA6W5XKT8 324 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 AP1G2O75843 785 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 B3GAT3O94766 335 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 EFNA5P52803 228 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 RBBP4Q09028 425 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 CLYBLQ8N0X4 340 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 PROM2Q8N271 834 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 TRPC4APQ8TEL6 797 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 LRRC1Q9BTT6 524 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 CEP41Q9BYV8 373 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 KIAA0556O60303 1618 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 HLA-DQA2P01906 255 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 ACOT1Q86TX2 421 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 TBKBP1A7MCY6 615 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 ACOX1Q15067 660 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 RDM1Q8NG50 284 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 ZNF669Q96BR6 464 aaPredicted RBP16.95■□□□□ 0.3
RGP1-201ENST00000378078 GPRASP2Q96D09 838 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 IL17RAQ96F46 866 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 IARS2Q9NSE4 1012 aaKnown RBP16.95■□□□□ 0.3
RGP1-201ENST00000378078 ZNF500O60304 480 aaPredicted RBP16.95■□□□□ 0.3
RGP1-201ENST00000378078 CCT7Q99832 543 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 DDIT4Q9NX09 232 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 VPS28Q9UK41 221 aa16.95■□□□□ 0.3
RGP1-201ENST00000378078 CFAP99D6REC4 459 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 LTFP02788 710 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
RGP1-201ENST00000378078 SKIV2L2P42285 1042 aaKnown RBP16.94■□□□□ 0.3
RGP1-201ENST00000378078 CNGA2Q16280 664 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 CYP4X1Q8N118 509 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 POLR1DQ9Y2S0 133 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 CLUP10909 449 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 SLC11A2P49281 568 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 KYAT1Q16773 422 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 NOTUMQ6P988 496 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 TRIM72Q6ZMU5 477 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 ZNRF3Q9ULT6 936 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 PSMD3O43242 534 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 MARSP56192 900 aaKnown RBP16.94■□□□□ 0.3
RGP1-201ENST00000378078 PMM1Q92871 262 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 FAR2Q96K12 515 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 KLHL1Q9NR64 748 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 DYRK1BQ9Y463 629 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 PHF20L1A8MW92 1017 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 STX7O15400 261 aaKnown RBP16.94■□□□□ 0.3
RGP1-201ENST00000378078 HALP42357 657 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 KCNT1Q5JUK3 1230 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 MTSS1LQ765P7 747 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 P3H2Q8IVL5 708 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 OR8H2Q8N162 312 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 TADA1Q96BN2 335 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 SMPD4Q9NXE4 827 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 C2orf81A6NN90 581 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 MT-CO1P00395 513 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 NOS3P29474 1203 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 OVGP1Q12889 678 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 ATP6V0D2Q8N8Y2 350 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 UMPSP11172 480 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 ITGAXP20702 1163 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 KCNJ1P48048 391 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 NUDT2P50583 147 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 ARF5P84085 180 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 SRSF11Q05519 484 aaKnown RBP16.94■□□□□ 0.3
RGP1-201ENST00000378078 SGSM1Q2NKQ1 1148 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 COLEC11Q9BWP8 271 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 HDHD2Q9H0R4 259 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 FAM96AQ9H5X1 160 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 SLC38A7Q9NVC3 462 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 SCN3BQ9NY72 215 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 PRKAB1Q9Y478 270 aa16.94■□□□□ 0.3
RGP1-201ENST00000378078 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 EGFRP00533 1210 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 VCLP18206 1134 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 TAF13Q15543 124 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 FNDC3BQ53EP0 1204 aaKnown RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 GLT1D1Q96MS3 346 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 OSBPL6Q9BZF3 934 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 ZCCHC17Q9NP64 241 aaKnown RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 KRCC1Q9NPI7 259 aaPredicted RBP16.93■□□□□ 0.3
RGP1-201ENST00000378078 ADAM21Q9UKJ8 722 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 ANKARQ7Z5J8 1434 aa16.93■□□□□ 0.3
RGP1-201ENST00000378078 HLA-DRAP01903 254 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms