RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.52■□□□□ 0.88
PCDH8-202ENST00000377942 CFAP99D6REC4 459 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 ALDH2P05091 517 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 PTGER2P43116 358 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 ZNF177Q13360 481 aaPredicted RBP20.52■□□□□ 0.88
PCDH8-202ENST00000377942 PDAP1Q13442 181 aaKnown RBP20.52■□□□□ 0.88
PCDH8-202ENST00000377942 ILDR1Q86SU0 546 aaPredicted RBP20.52■□□□□ 0.88
PCDH8-202ENST00000377942 NLRP14Q86W24 1093 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 ABRAQ8N0Z2 381 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 CENPKQ9BS16 269 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 AIPL1Q9NZN9 384 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 ANKRD26Q9UPS8 1709 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 CCDC195A0A1B0GUA6 201 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 SPAG7O75391 227 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 PYGLP06737 847 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 IL17RAQ96F46 866 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 IRF6O14896 467 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 PSMD10O75832 226 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 GFAPP14136 432 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 ITGA8P53708 1063 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 THOC1Q96FV9 657 aaKnown RBP20.52■□□□□ 0.88
PCDH8-202ENST00000377942 TINF2Q9BSI4 451 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 TRPM5Q9NZQ8 1165 aa20.52■□□□□ 0.88
PCDH8-202ENST00000377942 TLR2O60603 784 aa20.52■□□□□ 0.87
PCDH8-202ENST00000377942 PROSCO94903 275 aa20.52■□□□□ 0.87
PCDH8-202ENST00000377942 RALBP11234 206 aa20.52■□□□□ 0.87
PCDH8-202ENST00000377942 UBA1P22314 1058 aaKnown RBP20.52■□□□□ 0.87
PCDH8-202ENST00000377942 RABGAP1LQ5R372 815 aa20.52■□□□□ 0.87
PCDH8-202ENST00000377942 HMX1Q9NP08 348 aaPredicted RBP20.52■□□□□ 0.87
PCDH8-202ENST00000377942 SNTG2Q9NY99 539 aa20.52■□□□□ 0.87
PCDH8-202ENST00000377942 DPP7Q9UHL4 492 aa20.52■□□□□ 0.87
PCDH8-202ENST00000377942 ZNF263O14978 683 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 USP10Q14694 798 aaKnown RBP20.51■□□□□ 0.87
PCDH8-202ENST00000377942 CLEC16AQ2KHT3 1053 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 FOPNLQ96NB1 174 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 RRN3Q9NYV6 651 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 DCTN4Q9UJW0 460 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 NFAT5O94916 1531 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 MEIS2O14770 477 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 LGALS2P05162 132 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 SNRPAP09012 282 aaKnown RBP20.51■□□□□ 0.87
PCDH8-202ENST00000377942 PYGBP11216 843 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 SOX10P56693 466 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
PCDH8-202ENST00000377942 TEDDM1Q5T9Z0 273 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 CHMP2BQ9UQN3 213 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 TRPV2Q9Y5S1 764 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 FAM237AA0A1B0GTK4 181 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 MSCO60682 206 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 ANP32DO95626 131 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 KITP10721 976 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 KCNJ1P48048 391 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 GEMP55040 296 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 PTK6Q13882 451 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 TFDP3Q5H9I0 405 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 CCNJLQ8IV13 435 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 RPRD1AQ96P16 312 aaPredicted RBP20.51■□□□□ 0.87
PCDH8-202ENST00000377942 F5H5T6 163 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 C2CD2LO14523 706 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 KPNA1P52294 538 aaPredicted RBP20.51■□□□□ 0.87
PCDH8-202ENST00000377942 EFTUD2Q15029 972 aaKnown RBP eCLIP20.51■□□□□ 0.87
PCDH8-202ENST00000377942 THEMIS2Q5TEJ8 643 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 SLFN11Q7Z7L1 901 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 IPMKQ8NFU5 416 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 VCPIP1Q96JH7 1222 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 L3MBTL3Q96JM7 780 aaPredicted RBP20.51■□□□□ 0.87
PCDH8-202ENST00000377942 TMEM51Q9NW97 253 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 VPS9D1Q9Y2B5 631 aa20.51■□□□□ 0.87
PCDH8-202ENST00000377942 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 GYS2P54840 703 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 E2F4Q16254 413 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 ANGPTL8Q6UXH0 198 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 PORCNQ9H237 461 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 THEGQ9P2T0 379 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 MTA1Q13330 715 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 SH3RF1Q7Z6J0 888 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 FAM71DQ8N9W8 422 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 N4BP2L2Q92802 583 aaPredicted RBP20.5■□□□□ 0.87
PCDH8-202ENST00000377942 AFF4Q9UHB7 1163 aaKnown RBP20.5■□□□□ 0.87
PCDH8-202ENST00000377942 RRM1P23921 792 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 HADHAP40939 763 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 ADCYAP1R1P41586 468 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 TWF1Q12792 350 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 LRRC14Q15048 493 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 HABP4Q5JVS0 413 aaKnown RBP20.5■□□□□ 0.87
PCDH8-202ENST00000377942 TIGD7Q6NT04 549 aaPredicted RBP20.5■□□□□ 0.87
PCDH8-202ENST00000377942 C3orf62Q6ZUJ4 267 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 ZNF571Q7Z3V5 609 aaPredicted RBP20.5■□□□□ 0.87
PCDH8-202ENST00000377942 EXD1Q8NHP7 514 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 SLC35C1Q96A29 364 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 ATXN7L3BQ96GX2 97 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 YME1L1Q96TA2 773 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 KRT82Q9NSB4 513 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
PCDH8-202ENST00000377942 ETFBP38117 255 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 MAPK7Q13164 816 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 CDH18Q13634 790 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 ZDHHC17Q8IUH5 632 aa20.5■□□□□ 0.87
PCDH8-202ENST00000377942 C20orf96Q9NUD7 363 aaPredicted RBP20.5■□□□□ 0.87
PCDH8-202ENST00000377942 CARNS1A5YM72 827 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms