RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 OCMP0CE72 109 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 EIF2AK2P19525 551 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 SERPINB1P30740 379 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 MLH1P40692 756 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 ACTR2P61160 394 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 OTUD4Q01804 1114 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 USP4Q13107 963 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 GRAPQ13588 217 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 MTMR1Q13613 665 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 CCDC80Q76M96 950 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 GRAPLQ8TC17 118 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 VPS39Q96JC1 886 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 SRPK1Q96SB4 655 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 DCUN1D5Q9BTE7 237 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 MMTAG2Q9BU76 263 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 KLHL25Q9H0H3 589 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 NRDE2Q9H7Z3 1164 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 RMI1Q9H9A7 625 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 IL17RBQ9NRM6 502 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 RBAKQ9NYW8 714 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 NR2E1Q9Y466 385 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 UMODL1Q5DID0 1318 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 PEX11AO75192 247 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 GRK2P25098 689 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 NR1H2P55055 460 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 VCPP55072 806 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 FAM47CQ5HY64 1035 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 FAM102AQ5T9C2 384 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 ISLR2Q6UXK2 745 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 STKLD1Q8NE28 680 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 ACSF2Q96CM8 615 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 ZNF333Q96JL9 665 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 SH2D3AQ9BRG2 576 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 RSAD1Q9HA92 442 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 MRGBPQ9NV56 204 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 RRN3Q9NYV6 651 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 KLHL8Q9P2G9 620 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 SUN2Q9UH99 717 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 AGO2Q9UKV8 859 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 SORCS3Q9UPU3 1222 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 CHKBQ9Y259 395 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 SNX13Q9Y5W8 968 aa9.44□□□□□ -0.9
CRNKL1-201ENST00000377327 IQCA1LA6NCM1 817 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 DDX3YO15523 660 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 CREB1P16220 341 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 SDC4P31431 198 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 EIF2B2P49770 351 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 MARSP56192 900 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 USP46P62068 366 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ATP1A4Q13733 1029 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 SMTNL2Q2TAL5 461 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ZFP1Q6P2D0 407 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 AAGABQ6PD74 315 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 MOXD1Q6UVY6 613 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 DRAXINQ8NBI3 349 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 GIPC2Q8TF65 315 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 CEP19Q96LK0 163 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 PWWP2AQ96N64 755 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 TMEM79Q9BSE2 394 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 FRMD8P1Q9BZ68 369 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 RIOX1Q9H6W3 641 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 THAP1Q9NVV9 213 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 GINS2Q9Y248 185 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 AK5Q9Y6K8 562 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 AGLP35573 1532 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 F5H423 210 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 F8W8V4 182 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 H0Y626 953 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 APOL1O14791 398 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 GLRA3O75311 464 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ATP6V1G1O75348 118 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 BBOX1O75936 387 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 TRIM16O95361 564 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 SERPINB5P36952 375 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 C21orf59P57076 290 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 PSMC5P62195 406 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 PDAP1Q13442 181 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 MYBPC2Q14324 1141 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 PDPK2PQ6A1A2 396 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ZNF554Q86TJ5 538 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 CDR2LQ86X02 465 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 CLVS1Q8IUQ0 354 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ULK2Q8IYT8 1036 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 RMND5BQ96G75 393 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 SYT15Q9BQS2 421 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 TIPINQ9BVW5 301 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ILKAPQ9H0C8 392 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 NKX1-2Q9UD57 310 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 IPO11Q9UI26 975 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 TMEM59LQ9UK28 342 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 INPP5FQ9Y2H2 1132 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 SH3GLB1Q9Y371 365 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 RICTORQ6R327 1708 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 ITSN1Q15811 1721 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 INO80B-WBP1J3KQ70 363 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 SMIM22K7EJ46 135 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 M0R3G1 203 aa9.43□□□□□ -0.9
CRNKL1-201ENST00000377327 FSCN2O14926 492 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms