RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ROPN1BQ9BZX4 212 aaPredicted RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 WWP1Q9H0M0 922 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 ROPN1Q9HAT0 212 aaPredicted RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 FDFT1P37268 417 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 KCNJ1P48048 391 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 ZNF177Q13360 481 aaPredicted RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 ORC1Q13415 861 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 FOPNLQ96NB1 174 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 SLC7A5P2Q9GIP4 190 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 NDE1Q9NXR1 346 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 ZNF263O14978 683 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 AKT1P31749 480 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 ITGA8P53708 1063 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 MAPRE2Q15555 327 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 RBBP7Q16576 425 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 VSIG10LQ86VR7 867 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 RPRD1AQ96P16 312 aaPredicted RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 CFAP99D6REC4 459 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 TRPA1O75762 1119 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 DDX5P17844 614 aaKnown RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 MAP4P27816 1152 aaKnown RBP18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 NT5DC1Q5TFE4 455 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 NT5DC4Q86YG4 428 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 FAM71DQ8N9W8 422 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 FAM118BQ9BPY3 351 aa18.65■□□□□ 0.58
CLSTN1-202ENST00000377298 SETSIPP0DME0 302 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 PYGBP11216 843 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 RALBP11234 206 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 PSEN2P49810 448 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 CDH18Q13634 790 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 DDIASQ8IXT1 998 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 YME1L1Q96TA2 773 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 SMARCAL1Q9NZC9 954 aa18.64■□□□□ 0.58
CLSTN1-202ENST00000377298 PIK3CDO00329 1044 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 PYGLP06737 847 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 PEX19P40855 299 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 SARSP49591 514 aaKnown RBP18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 CCDC15Q0P6D6 951 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 SYTL3Q4VX76 610 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 MTMR9Q96QG7 549 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 CNPY3Q9BT09 278 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 C20orf96Q9NUD7 363 aaPredicted RBP18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 INTS13Q9NVM9 706 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 SNTG2Q9NY99 539 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 THEGQ9P2T0 379 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 TSR3Q9UJK0 312 aaKnown RBP18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 C3P01024 1663 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 A0A0A6YYK5 440 aaPredicted RBP18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 ALDH2P05091 517 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 ATN1P54259 1190 aaPredicted RBP18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 KRT80Q6KB66 452 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 C3orf62Q6ZUJ4 267 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 KCNA2P16389 499 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 BST2Q10589 180 aaKnown RBP18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 DPF3Q92784 378 aa18.64■□□□□ 0.57
CLSTN1-202ENST00000377298 EML1O00423 815 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 FSCN1Q16658 493 aaKnown RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 PAN2Q504Q3 1202 aaKnown RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 SZRD1Q7Z422 152 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 MFN1Q8IWA4 741 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 USP13Q92995 863 aaPredicted RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 SGSM3Q96HU1 749 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 CCDC138Q96M89 665 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 TRPM5Q9NZQ8 1165 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 MYPNQ86TC9 1320 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 F5H5T6 163 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 H0Y626 953 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 RABGAP1LQ5R372 815 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 NYAP1Q6ZVC0 841 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 ELMO2Q96JJ3 720 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 KRT82Q9NSB4 513 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 SNRPAP09012 282 aaKnown RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 ARHGDIAP52565 204 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 TEDDM1Q5T9Z0 273 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 REXO1L1PQ8IX06 675 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 RIBC1Q8N443 379 aaPredicted RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 SLC25A41Q8N5S1 370 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 CINPQ9BW66 212 aaPredicted RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 BLOC1S4Q9NUP1 217 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 BARX2Q9UMQ3 279 aaPredicted RBP18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 GOLGA8RI6L899 631 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 MCL1Q07820 350 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 PTK6Q13882 451 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 SDE2Q6IQ49 451 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 SLFN11Q7Z7L1 901 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 GPR63Q9BZJ6 419 aa18.63■□□□□ 0.57
CLSTN1-202ENST00000377298 IRF6O14896 467 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 CSDE1O75534 798 aaKnown RBP18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 PRLRP16471 622 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 ESRRGP62508 458 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 LONRF1Q17RB8 773 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 CELF4Q9BZC1 486 aaKnown RBP18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 CYP39A1Q9NYL5 469 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 ATP11BQ9Y2G3 1177 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 MGEA5O60502 916 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 RRM1P23921 792 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 CAPRIN1Q14444 709 aaKnown RBP18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 MAP4K3Q8IVH8 894 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms