RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 FBXO41Q8TF61 875 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 U2AF1L4Q8WU68 220 aaKnown RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 TEPSINQ96N21 525 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 TAAR1Q96RJ0 339 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 LBHD1Q9BQE6 289 aaPredicted RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 NUP85Q9BW27 656 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 KIAA1683Q9H0B3 1180 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 PCDHB2Q9Y5E7 798 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 DDX3XO00571 662 aaKnown RBP eCLIP16.26■□□□□ 0.193e-36■■■■■ 27.3
FXN-201ENST00000377270 CYP1A2P05177 515 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 SNRNP48Q6IEG0 339 aaKnown RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 DEFB132Q7Z7B7 95 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 EPS8L3Q8TE67 593 aaKnown RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 DGCR14Q96DF8 476 aaKnown RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 PCIF1Q9H4Z3 704 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 DDX43Q9NXZ2 648 aaKnown RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 SCHIP1Q9P0W5 487 aaPredicted RBP16.26■□□□□ 0.19
FXN-201ENST00000377270 KLHL14Q9P2G3 628 aa16.26■□□□□ 0.19
FXN-201ENST00000377270 OPHN1O60890 802 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 PEX14O75381 377 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
FXN-201ENST00000377270 PRKACBP22694 351 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 ANXA13P27216 316 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 SOX5P35711 763 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 QARSP47897 775 aaKnown RBP16.25■□□□□ 0.19
FXN-201ENST00000377270 RPS6P62753 249 aaKnown RBP16.25■□□□□ 0.19
FXN-201ENST00000377270 ITGA9Q13797 1035 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 RNF43Q68DV7 783 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 POTEAQ6S8J7 498 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 TPCN2Q8NHX9 752 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 PRPF31Q8WWY3 499 aaKnown RBP16.25■□□□□ 0.19
FXN-201ENST00000377270 RBMX2Q9Y388 322 aaKnown RBP16.25■□□□□ 0.19
FXN-201ENST00000377270 ARIH1Q9Y4X5 557 aaPredicted RBP16.25■□□□□ 0.19
FXN-201ENST00000377270 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 EPHB2P29323 1055 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 SLCO1A2P46721 670 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 RARRES1P49788 294 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 PLTPP55058 493 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 DR1Q01658 176 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 AP1B1Q10567 949 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 BFSP1Q12934 665 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 MGARPQ8TDB4 240 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 GIPC3Q8TF64 312 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 ITPKCQ96DU7 683 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 ANKRD36BP1Q96IX9 119 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 INTS2Q9H0H0 1204 aaKnown RBP16.25■□□□□ 0.19
FXN-201ENST00000377270 MOSPD1Q9UJG1 213 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 MYH11P35749 1972 aa16.25■□□□□ 0.19
FXN-201ENST00000377270 TISP43B9A030 160 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 RASGRF2O14827 1237 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 ATP5HO75947 161 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 MXI1P50539 228 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 COG7P83436 770 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 MYL7Q01449 175 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 ZBTB17Q13105 803 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 AUHQ13825 339 aaKnown RBP16.24■□□□□ 0.19
FXN-201ENST00000377270 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 SLC9A9Q8IVB4 645 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 RAVER1Q8IY67 606 aaKnown RBP16.24■□□□□ 0.19
FXN-201ENST00000377270 ANKLE1Q8NAG6 615 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 AS3MTQ9HBK9 375 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 RGS17Q9UGC6 210 aaPredicted RBP16.24■□□□□ 0.19
FXN-201ENST00000377270 NENFQ9UMX5 172 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 FAF1Q9UNN5 650 aaPredicted RBP16.24■□□□□ 0.19
FXN-201ENST00000377270 STXBP5LQ9Y2K9 1186 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 LINC00854A0A1B0GVQ3 168 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 TMEM150BA6NC51 233 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 VILLO15195 856 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 CSPG5O95196 566 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 DDX5P17844 614 aaKnown RBP16.24■□□□□ 0.19
FXN-201ENST00000377270 EIF2B2P49770 351 aaKnown RBP16.24■□□□□ 0.19
FXN-201ENST00000377270 PTENP60484 403 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 MGAT5Q09328 741 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 MTMR2Q13614 643 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 PCSK7Q16549 785 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 PHLDB2Q86SQ0 1253 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 USP29Q9HBJ7 922 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 ZNF304Q9HCX3 659 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 TBC1D22BQ9NU19 505 aa16.24■□□□□ 0.19
FXN-201ENST00000377270 DBR1Q9UK59 544 aaKnown RBP16.24■□□□□ 0.19
FXN-201ENST00000377270 ANKRD34BA5PLL1 514 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 FGGP02679 453 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 KRT13P13646 458 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SLC34A1Q06495 639 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SPP2Q13103 211 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 PGM5Q15124 567 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 ARHGAP44Q17R89 818 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 SLFN11Q7Z7L1 901 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 GLYCTKQ8IVS8 523 aa16.23■□□□□ 0.19
FXN-201ENST00000377270 LNX1Q8TBB1 728 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms