RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 BARX2Q9UMQ3 279 aaPredicted RBP21.3■■□□□ 1
VSX1-202ENST00000376709 LRCH4O75427 683 aa21.3■■□□□ 1
VSX1-202ENST00000376709 FAM107AO95990 144 aa21.3■■□□□ 1
VSX1-202ENST00000376709 HMGCRP04035 888 aa21.3■■□□□ 1
VSX1-202ENST00000376709 KRT7P08729 469 aa21.3■■□□□ 1
VSX1-202ENST00000376709 VDRP11473 427 aa21.3■■□□□ 1
VSX1-202ENST00000376709 HOXD8P13378 290 aaPredicted RBP21.3■■□□□ 1
VSX1-202ENST00000376709 IFI35P80217 286 aaPredicted RBP21.3■■□□□ 1
VSX1-202ENST00000376709 IQSEC1Q6DN90 963 aa21.3■■□□□ 1
VSX1-202ENST00000376709 DRICH1Q6PGQ1 229 aaPredicted RBP21.3■■□□□ 1
VSX1-202ENST00000376709 B4GALNT4Q76KP1 1039 aa21.3■■□□□ 1
VSX1-202ENST00000376709 NT5DC4Q86YG4 428 aa21.3■■□□□ 1
VSX1-202ENST00000376709 SELENOSQ9BQE4 189 aa21.3■■□□□ 1
VSX1-202ENST00000376709 ROPN1BQ9BZX4 212 aaPredicted RBP21.3■■□□□ 1
VSX1-202ENST00000376709 ROPN1Q9HAT0 212 aaPredicted RBP21.3■■□□□ 1
VSX1-202ENST00000376709 TRAPPC3O43617 180 aa21.29■■□□□ 1
VSX1-202ENST00000376709 TTC4O95801 387 aa21.29■■□□□ 1
VSX1-202ENST00000376709 GRM5P41594 1212 aa21.29■■□□□ 1
VSX1-202ENST00000376709 NDST1P52848 882 aa21.29■■□□□ 1
VSX1-202ENST00000376709 GSCP56915 257 aaPredicted RBP21.29■■□□□ 1
VSX1-202ENST00000376709 ZNF268Q14587 947 aaPredicted RBP21.29■■□□□ 1
VSX1-202ENST00000376709 DCAF4L1Q3SXM0 396 aa21.29■■□□□ 1
VSX1-202ENST00000376709 RASAL3Q86YV0 1011 aa21.29■■□□□ 1
VSX1-202ENST00000376709 PPP1R13LQ8WUF5 828 aa21.29■■□□□ 1
VSX1-202ENST00000376709 GMNCA6NCL1 334 aa21.29■■□□□ 1
VSX1-202ENST00000376709 NPTXRO95502 500 aa21.29■■□□□ 1
VSX1-202ENST00000376709 ZNF157P51786 506 aaPredicted RBP21.29■■□□□ 1
VSX1-202ENST00000376709 CORO7P57737 925 aa21.29■■□□□ 1
VSX1-202ENST00000376709 PLCB3Q01970 1234 aa21.29■■□□□ 1
VSX1-202ENST00000376709 SLC25A11Q02978 314 aaKnown RBP21.29■■□□□ 1
VSX1-202ENST00000376709 MYO1EQ12965 1108 aa21.29■■□□□ 1
VSX1-202ENST00000376709 CNGA2Q16280 664 aa21.29■■□□□ 1
VSX1-202ENST00000376709 KYNUQ16719 465 aa21.29■■□□□ 1
VSX1-202ENST00000376709 LONRF1Q17RB8 773 aa21.29■■□□□ 1
VSX1-202ENST00000376709 KCNT1Q5JUK3 1230 aa21.29■■□□□ 1
VSX1-202ENST00000376709 MDM1Q8TC05 714 aa21.29■■□□□ 1
VSX1-202ENST00000376709 PWWP2AQ96N64 755 aa21.29■■□□□ 1
VSX1-202ENST00000376709 TRIP11Q15643 1979 aa21.28■■□□□ 1
VSX1-202ENST00000376709 GPD2P43304 727 aa21.28■■□□□ 1
VSX1-202ENST00000376709 INCA1Q0VD86 236 aa21.28■■□□□ 1
VSX1-202ENST00000376709 AUHQ13825 339 aaKnown RBP21.28■■□□□ 1
VSX1-202ENST00000376709 MORN1Q5T089 497 aa21.28■■□□□ 1
VSX1-202ENST00000376709 TTC39CQ8N584 583 aa21.28■■□□□ 1
VSX1-202ENST00000376709 UBA3Q8TBC4 463 aa21.28■■□□□ 1
VSX1-202ENST00000376709 IPO4Q8TEX9 1081 aaKnown RBP21.28■■□□□ 1
VSX1-202ENST00000376709 LENG1Q96BZ8 264 aaPredicted RBP21.28■■□□□ 1
VSX1-202ENST00000376709 SLC5A4Q9NY91 659 aa21.28■■□□□ 1
VSX1-202ENST00000376709 FLRT1Q9NZU1 646 aa21.28■■□□□ 1
VSX1-202ENST00000376709 ZNF236Q9UL36 1845 aa21.28■■□□□ 1
VSX1-202ENST00000376709 RRN3P2A6NIE6 340 aa21.27■■□□□ 1
VSX1-202ENST00000376709 DYNC1LI2O43237 492 aaPredicted RBP21.27■■□□□ 1
VSX1-202ENST00000376709 ITGBL1O95965 494 aaPredicted RBP21.27■■□□□ 1
VSX1-202ENST00000376709 MMP13P45452 471 aa21.27■■□□□ 1
VSX1-202ENST00000376709 ARSEP51690 589 aa21.27■■□□□ 1
VSX1-202ENST00000376709 FAM102AQ5T9C2 384 aaPredicted RBP21.27■■□□□ 1
VSX1-202ENST00000376709 CATSPER4Q7RTX7 472 aa21.27■■□□□ 1
VSX1-202ENST00000376709 APBB1IPQ7Z5R6 666 aaPredicted RBP21.27■■□□□ 1
VSX1-202ENST00000376709 ALLCQ8N6M5 410 aa21.27■■□□□ 1
VSX1-202ENST00000376709 ARFGAP1Q8N6T3 406 aa21.27■■□□□ 1
VSX1-202ENST00000376709 NT5C1AQ9BXI3 368 aa21.27■■□□□ 1
VSX1-202ENST00000376709 GCOM2Q9BZD3 368 aaPredicted RBP21.27■■□□□ 1
VSX1-202ENST00000376709 FAM169AQ9Y6X4 670 aa21.27■■□□□ 1
VSX1-202ENST00000376709 STAU1O95793 577 aaKnown RBP21.27■■□□□ 1
VSX1-202ENST00000376709 IL1R2P27930 398 aa21.27■■□□□ 1
VSX1-202ENST00000376709 GABRB2P47870 512 aa21.27■■□□□ 1
VSX1-202ENST00000376709 VCPP55072 806 aaKnown RBP21.27■■□□□ 1
VSX1-202ENST00000376709 DYNLT1P63172 113 aa21.27■■□□□ 1
VSX1-202ENST00000376709 MAP2K5Q13163 448 aa21.27■■□□□ 1
VSX1-202ENST00000376709 TAF1CQ15572 869 aaPredicted RBP21.27■■□□□ 1
VSX1-202ENST00000376709 MFSD5Q6N075 450 aa21.27■■□□□ 1
VSX1-202ENST00000376709 HIBCHQ6NVY1 386 aaPredicted RBP21.27■■□□□ 1
VSX1-202ENST00000376709 TAOK1Q7L7X3 1001 aa21.27■■□□□ 1
VSX1-202ENST00000376709 GLIS1Q8NBF1 620 aa21.27■■□□□ 1
VSX1-202ENST00000376709 RNF8O76064 485 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 CHN1P15882 459 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 PDE4CQ08493 712 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 MCRS1Q96EZ8 462 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 SNTG2Q9NY99 539 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 NINJ2Q9NZG7 142 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 PCSK1NQ9UHG2 260 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 DRG1Q9Y295 367 aaKnown RBP21.26■□□□□ 0.99
VSX1-202ENST00000376709 DOCK3Q8IZD9 2030 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 C3orf70A6NLC5 250 aaPredicted RBP21.26■□□□□ 0.99
VSX1-202ENST00000376709 SGK1O00141 431 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 ZSCAN5DPP0CG00 497 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 GPS1Q13098 491 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 SLC27A1Q6PCB7 646 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 SERPINB12Q96P63 405 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 TMEM121Q9BTD3 319 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 ADAMTS10Q9H324 1103 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 FAM124BQ9H5Z6 455 aaPredicted RBP21.26■□□□□ 0.99
VSX1-202ENST00000376709 TSPAN16Q9UKR8 245 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 KIAA1257Q9ULG3 409 aa21.26■□□□□ 0.99
VSX1-202ENST00000376709 DNALI1O14645 258 aaPredicted RBP21.25■□□□□ 0.99
VSX1-202ENST00000376709 ITGAVP06756 1048 aa21.25■□□□□ 0.99
VSX1-202ENST00000376709 HOXA11P31270 313 aaPredicted RBP21.25■□□□□ 0.99
VSX1-202ENST00000376709 YARSP54577 528 aaKnown RBP21.25■□□□□ 0.99
VSX1-202ENST00000376709 OASLQ15646 514 aaKnown RBP21.25■□□□□ 0.99
VSX1-202ENST00000376709 CCL14Q16627 93 aa21.25■□□□□ 0.99
VSX1-202ENST00000376709 CCDC38Q502W7 563 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms