RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 GABRDO14764 452 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 PRPF6O94906 941 aaKnown RBP15.81■□□□□ 0.12
HDAC6-204ENST00000376643 FAM163BP0C2L3 166 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 USP17L7P0C7H9 530 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 DRD1P21728 446 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 ANXA13P27216 316 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 SOX9P48436 509 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 PPP3CCP48454 512 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 ASIC1P78348 528 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 NR1H3Q13133 447 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 FAM173BQ6P4H8 233 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 CNNM4Q6P4Q7 775 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 CEP68Q76N32 757 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 ATP2A3Q93084 1043 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 HPDLQ96IR7 371 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 FNBP1Q96RU3 617 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 PANK2Q9BZ23 570 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 PCIF1Q9H4Z3 704 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 KBTBD4Q9NVX7 518 aa15.81■□□□□ 0.12
HDAC6-204ENST00000376643 GPR179Q6PRD1 2367 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 TRDMT1O14717 391 aaKnown RBP15.8■□□□□ 0.12
HDAC6-204ENST00000376643 CUTAO60888 179 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 CKMP06732 381 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 KCNB1Q14721 858 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 MTF1Q14872 753 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 TXNDC8Q6A555 127 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 TXNDC11Q6PKC3 985 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 WDR5BQ86VZ2 330 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 KIAA1958Q8N8K9 716 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 NETO1Q8TDF5 533 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 USP13Q92995 863 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-204ENST00000376643 LRRC3BQ96PB8 259 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 SYT15Q9BQS2 421 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 TRIM9Q9C026 710 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 IKZF4Q9H2S9 585 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 RBM12Q9NTZ6 932 aaKnown RBP15.8■□□□□ 0.12
HDAC6-204ENST00000376643 HSPBP1Q9NZL4 362 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 MAGEC2Q9UBF1 373 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-204ENST00000376643 GTF3C4Q9UKN8 822 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 SLC8A2Q9UPR5 921 aa15.8■□□□□ 0.12
HDAC6-204ENST00000376643 CHURC1-FNTBB4DL54 471 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 K7ESF4 209 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 TRIM66O15016 1216 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 AKAP3O75969 853 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 ACAT1P24752 427 aaKnown RBP15.79■□□□□ 0.12
HDAC6-204ENST00000376643 CYP2F1P24903 491 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 IFNAR2P48551 515 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 FNTBP49356 437 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 TNK2Q07912 1038 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 GAS6Q14393 721 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 DDR2Q16832 855 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 TMEM196Q5HYL7 178 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 FAM26FQ5R3K3 315 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 ATL3Q6DD88 541 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 FAM171BQ6P995 826 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 Q6ZS52 159 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 TMEM150AQ86TG1 271 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 GPIHBP1Q8IV16 184 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 SCN4BQ8IWT1 228 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 CAMKK1Q8N5S9 505 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 TTC8Q8TAM2 541 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 CXorf38Q8TB03 319 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 GOLGA5Q8TBA6 731 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 DDX1Q92499 740 aaKnown RBP15.79■□□□□ 0.12
HDAC6-204ENST00000376643 ACDQ96AP0 544 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 LOXL4Q96JB6 756 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 SPATA17Q96L03 361 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 PKMYT1Q99640 499 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 EBF3Q9H4W6 596 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 TRPC7Q9HCX4 862 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 TMLHEQ9NVH6 421 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 FAM13BQ9NYF5 915 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 SIX4Q9UIU6 781 aa15.79■□□□□ 0.12
HDAC6-204ENST00000376643 HSP90AA1P07900 732 aaKnown RBP15.78■□□□□ 0.12
HDAC6-204ENST00000376643 TCF3P15923 654 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 TNNI1P19237 187 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 WARSP23381 471 aaKnown RBP15.78■□□□□ 0.12
HDAC6-204ENST00000376643 TNNC1P63316 161 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 CSRP2Q16527 193 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 SNRNP35Q16560 246 aaKnown RBP15.78■□□□□ 0.12
HDAC6-204ENST00000376643 SOWAHAQ2M3V2 549 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 ZNF507Q8TCN5 953 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 OSCP1Q8WVF1 389 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 DHX58Q96C10 678 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 P2RY13Q9BPV8 354 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 SMG9Q9H0W8 520 aaKnown RBP15.78■□□□□ 0.12
HDAC6-204ENST00000376643 SNX25Q9H3E2 840 aa15.78■□□□□ 0.12
HDAC6-204ENST00000376643 DUS2Q9NX74 493 aaKnown RBP15.78■□□□□ 0.12
HDAC6-204ENST00000376643 CEP250Q9BV73 2442 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 A0A087X0B3 334 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 NFATC1O95644 943 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 GRIK1P39086 918 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 WNT7BP56706 349 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 SPEM2Q0P670 501 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 E2F4Q16254 413 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 DENND5BQ6ZUT9 1274 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 UNC13DQ70J99 1090 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 CACNA2D4Q7Z3S7 1137 aa15.77■□□□□ 0.12
HDAC6-204ENST00000376643 LIMS2Q7Z4I7 341 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms