RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CSRP2Q16527 193 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 LMBRD2Q68DH5 695 aaPredicted RBP16.05■□□□□ 0.16
CLCN6-204ENST00000376491 NAIF1Q69YI7 327 aaPredicted RBP16.05■□□□□ 0.16
CLCN6-204ENST00000376491 CCDC73Q6ZRK6 1079 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 PRR23CQ6ZRP0 262 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.05■□□□□ 0.16
CLCN6-204ENST00000376491 SYCP3Q8IZU3 236 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 MRPS31Q92665 395 aaKnown RBP16.05■□□□□ 0.16
CLCN6-204ENST00000376491 MYRFLQ96LU7 910 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 SLC22A12Q96S37 553 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 MTMR12Q9C0I1 747 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 KIF9Q9HAQ2 790 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 ABCB6Q9NP58 842 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
CLCN6-204ENST00000376491 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
CLCN6-204ENST00000376491 PTPRDP23468 1912 aa16.05■□□□□ 0.16
CLCN6-204ENST00000376491 PTPRJQ12913 1337 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.04■□□□□ 0.16
CLCN6-204ENST00000376491 SLC30A4O14863 429 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 GDF9O60383 454 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 EGFP01133 1207 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 KRT19P08727 400 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 STAT6P42226 847 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 PXNP49023 591 aaPredicted RBP16.04■□□□□ 0.16
CLCN6-204ENST00000376491 RBP5P82980 135 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 MYL7Q01449 175 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 ALCAMQ13740 583 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 ZNF268Q14587 947 aaPredicted RBP16.04■□□□□ 0.16
CLCN6-204ENST00000376491 SLC39A14Q15043 492 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 SOWAHAQ2M3V2 549 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 TMEM86AQ8N2M4 240 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 GPD1LQ8N335 351 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 TOP6BLQ8N6T0 577 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 NETO1Q8TDF5 533 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
CLCN6-204ENST00000376491 CYP2S1Q96SQ9 504 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 MTMR6Q9Y217 621 aa16.04■□□□□ 0.16
CLCN6-204ENST00000376491 KIAA1549LQ6ZVL6 1849 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 ATP2C2O75185 946 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 GALK1P51570 392 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 RPL10AP62906 217 aaKnown RBP16.03■□□□□ 0.16
CLCN6-204ENST00000376491 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLCN6-204ENST00000376491 MTF1Q14872 753 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 CFAP221Q4G0U5 840 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 FAM171BQ6P995 826 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 CEP68Q76N32 757 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 LIMS2Q7Z4I7 341 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 ADGRF2Q8IZF7 708 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 PDILTQ8N807 584 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 SPATA18Q8TC71 538 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 HPS3Q969F9 1004 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 TRMT2BQ96GJ1 504 aaKnown RBP16.03■□□□□ 0.16
CLCN6-204ENST00000376491 CNTNAP3BQ96NU0 1288 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 CNTNAP3Q9BZ76 1288 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 INTS13Q9NVM9 706 aa16.03■□□□□ 0.16
CLCN6-204ENST00000376491 UXTQ9UBK9 157 aaPredicted RBP16.03■□□□□ 0.16
CLCN6-204ENST00000376491 HELZP42694 1942 aaKnown RBP16.03■□□□□ 0.16
CLCN6-204ENST00000376491 RNF40O75150 1001 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.16
CLCN6-204ENST00000376491 TMEM191BP0C7N4 346 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 LMO2P25791 158 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 GJA4P35212 333 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 HOXD13P35453 343 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 LHX1P48742 406 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 FAM160A1Q05DH4 1040 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 ZNF77Q15935 545 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 CC2D1AQ6P1N0 951 aaPredicted RBP16.02■□□□□ 0.16
CLCN6-204ENST00000376491 CBWD2Q8IUF1 395 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 SPATA2LQ8IUW3 424 aaPredicted RBP16.02■□□□□ 0.16
CLCN6-204ENST00000376491 SCN4BQ8IWT1 228 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 KBTBD7Q8WVZ9 684 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 GAB3Q8WWW8 586 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 EZH1Q92800 747 aaPredicted RBP16.02■□□□□ 0.16
CLCN6-204ENST00000376491 TMEM206Q9H813 350 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 ECT2Q9H8V3 914 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 TRPC7Q9HCX4 862 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 GCNT4Q9P109 453 aa16.02■□□□□ 0.16
CLCN6-204ENST00000376491 CNOT1A5YKK6 2376 aaKnown RBP16.01■□□□□ 0.15
CLCN6-204ENST00000376491 CACNA1BQ00975 2339 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 CCDC163A0A0D9SF12 145 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 C2orf78A6NCI8 922 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 PCSK1P29120 753 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 PSMC1P62191 440 aaKnown RBP16.01■□□□□ 0.15
CLCN6-204ENST00000376491 USP4Q13107 963 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 PDGFRLQ15198 375 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 KBTBD6Q86V97 674 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 CCDC65Q8IXS2 484 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
CLCN6-204ENST00000376491 FUBP3Q96I24 572 aaKnown RBP eCLIP16.01■□□□□ 0.15
CLCN6-204ENST00000376491 HPDLQ96IR7 371 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 P2RY13Q9BPV8 354 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 SYT15Q9BQS2 421 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 CRTAC1Q9NQ79 661 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 DUS2Q9NX74 493 aaKnown RBP16.01■□□□□ 0.15
CLCN6-204ENST00000376491 NME7Q9Y5B8 376 aa16.01■□□□□ 0.15
CLCN6-204ENST00000376491 WNT6Q9Y6F9 365 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms