RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 NEU2Q9Y3R4 380 aa13.58□□□□□ -0.23
MSH5-204ENST00000375755 ARID2Q68CP9 1835 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 A0A1W2PPM1 405 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 PDLIM1O00151 329 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 HAUS5O94927 633 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 RTP1P59025 263 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 NR1H3Q13133 447 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 STMN2Q93045 179 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
MSH5-204ENST00000375755 RBM15Q96T37 977 aaKnown RBP eCLIP13.58□□□□□ -0.244e-7■■■□□ 15.4
MSH5-204ENST00000375755 CHCHD3Q9NX63 227 aaKnown RBP13.58□□□□□ -0.24
MSH5-204ENST00000375755 SEL1LQ9UBV2 794 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
MSH5-204ENST00000375755 LOC285556D6RIA3 1793 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 ZWINTO95229 277 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 LYPLA2O95372 231 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 ABHD2P08910 425 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 SLC18A1P54219 525 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 NFIL3Q16649 462 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 GSTA3Q16772 222 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.24
MSH5-204ENST00000375755 LVRNQ6Q4G3 990 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 RFX8Q6ZV50 586 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 RELL1Q8IUW5 271 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 EPS8L1Q8TE68 723 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 GRK7Q8WTQ7 553 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 MCUR1Q96AQ8 359 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 LARSQ9P2J5 1176 aaKnown RBP13.58□□□□□ -0.24
MSH5-204ENST00000375755 HEY2Q9UBP5 337 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 ZNF212Q9UDV6 495 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 NOCTQ9UK39 431 aaKnown RBP13.58□□□□□ -0.24
MSH5-204ENST00000375755 PHF24Q9UPV7 400 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 FRMD4BQ9Y2L6 1034 aa13.58□□□□□ -0.24
MSH5-204ENST00000375755 WDR91A4D1P6 747 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 TYROBPO43914 113 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 SPATA31D3P0C874 917 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 NPTX2P47972 431 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 PRKCEQ02156 737 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 THOC5Q13769 683 aaKnown RBP13.57□□□□□ -0.24
MSH5-204ENST00000375755 MTERF2Q49AM1 385 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 FYB2Q5VWT5 728 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 SPATA31D4Q6ZUB0 917 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 SDCCAG8Q86SQ7 713 aaPredicted RBP13.57□□□□□ -0.24
MSH5-204ENST00000375755 VPS52Q8N1B4 723 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 SAMD3Q8N6K7 520 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 NSL1Q96IY1 281 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 NR1H4Q96RI1 486 aaPredicted RBP13.57□□□□□ -0.24
MSH5-204ENST00000375755 XPNPEP1Q9NQW7 623 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 DDX43Q9NXZ2 648 aaKnown RBP13.57□□□□□ -0.24
MSH5-204ENST00000375755 TAS2R1Q9NYW7 299 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 CYP2C8P10632 490 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 ETS2P15036 469 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 AMPD1P23109 780 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 ADSSP30520 456 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 SFNP31947 248 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 BFSP1Q12934 665 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 LY6KQ17RY6 165 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 CAPN12Q6ZSI9 719 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 HEMGNQ9BXL5 484 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 MAK16Q9BXY0 300 aaKnown RBP13.57□□□□□ -0.24
MSH5-204ENST00000375755 SAYSD1Q9NPB0 183 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 RBPJLQ9UBG7 517 aa13.57□□□□□ -0.24
MSH5-204ENST00000375755 A0A0G2JMZ2 1700 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 A0A0G2JND7 137 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 GZMAP12544 262 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 MAN1A1P33908 653 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 CETN2P41208 172 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 PIK3CAP42336 1068 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 FASTKD3Q14CZ7 662 aaKnown RBP13.56□□□□□ -0.24
MSH5-204ENST00000375755 STXBP2Q15833 593 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 ANKRD13AQ8IZ07 590 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 ZNF398Q8TD17 642 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 VCX3BQ9H321 246 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 VCX3AQ9NNX9 186 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 FBXO6Q9NRD1 293 aaPredicted RBP13.56□□□□□ -0.24
MSH5-204ENST00000375755 ANKFY1Q9P2R3 1169 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 ATXN10Q9UBB4 475 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 ARIH2O95376 493 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 TROVE2P10155 538 aaKnown RBP eCLIP13.56□□□□□ -0.24
MSH5-204ENST00000375755 RFX1P22670 979 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 ERFP50548 548 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 MAP1SQ66K74 1059 aaPredicted RBP13.56□□□□□ -0.24
MSH5-204ENST00000375755 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 SLC47A2Q86VL8 602 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 ERO1BQ86YB8 467 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 TDRPQ86YL5 185 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 RIOX2Q8IUF8 465 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
MSH5-204ENST00000375755 TMEM143Q96AN5 459 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 CFAP57Q96MR6 1250 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 TMEM165Q9HC07 324 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 GTF3C4Q9UKN8 822 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 UMODL1Q5DID0 1318 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 EMSYQ7Z589 1322 aa13.56□□□□□ -0.24
MSH5-204ENST00000375755 CYP26A1O43174 497 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 ADRB2P07550 413 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms