RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 EFR3BQ9Y2G0 817 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 MYH9P35579 1960 aaKnown RBP15.29■□□□□ 0.04
MSH5-201ENST00000375703 SIGLEC16A6NMB1 481 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 OGTO15294 1046 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 MSCO60682 206 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 KRT7P08729 469 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 CLNS1AP54105 237 aaKnown RBP15.29■□□□□ 0.04
MSH5-201ENST00000375703 GDF10P55107 478 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
MSH5-201ENST00000375703 HADHQ16836 314 aaKnown RBP15.29■□□□□ 0.04
MSH5-201ENST00000375703 ANKRD22Q5VYY1 191 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 DENND1BQ6P3S1 775 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 MICALL2Q8IY33 904 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 TTC13Q8NBP0 860 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 CPT1BQ92523 772 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 ACO2Q99798 780 aaKnown RBP15.29■□□□□ 0.04
MSH5-201ENST00000375703 HAO1Q9UJM8 370 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 CLUHO75153 1309 aa15.29■□□□□ 0.04
MSH5-201ENST00000375703 MAFO75444 373 aaPredicted RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 TARSP26639 723 aaKnown RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 ZNF699Q32M78 642 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 MSS51Q4VC12 460 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 EP400NLQ6ZTU2 488 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 RHPN2Q8IUC4 686 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 TAB3Q8N5C8 712 aaPredicted RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 ATP11CQ8NB49 1132 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 DIAPH2O60879 1101 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 ZWINTO95229 277 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 CD19P15391 556 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 KDELR1P24390 212 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 IL1R2P27930 398 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 RPL22P35268 128 aaKnown RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 YWHAEP62258 255 aaKnown RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 SLC25A11Q02978 314 aaKnown RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 SURF1Q15526 300 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 PARP6Q2NL67 630 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 PALM2Q8IXS6 379 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 ARFGAP1Q8N6T3 406 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 NAT8LQ8N9F0 302 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 JOSD2Q8TAC2 188 aa15.28■□□□□ 0.04
MSH5-201ENST00000375703 UTP4Q969X6 686 aaKnown RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 FRMD8P1Q9BZ68 369 aaPredicted RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 NXF1Q9UBU9 619 aaKnown RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 COL11A1P12107 1806 aaPredicted RBP15.28■□□□□ 0.04
MSH5-201ENST00000375703 LRCH4O75427 683 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 PIAS1O75925 651 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 RPS12P25398 132 aaKnown RBP15.27■□□□□ 0.04
MSH5-201ENST00000375703 EFTUD2Q15029 972 aaKnown RBP eCLIP15.27■□□□□ 0.049e-10■■■■■ 39.2
MSH5-201ENST00000375703 PTPN20Q4JDL3 420 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 FAM160B1Q5W0V3 765 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 ADGRD1Q6QNK2 874 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 OTOAQ7RTW8 1153 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 THNSL1Q8IYQ7 743 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 KIAA0319LQ8IZA0 1049 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 TMEM237Q96Q45 408 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 LRMDAQ9H2I8 198 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 SSU72Q9NP77 194 aaKnown RBP15.27■□□□□ 0.04
MSH5-201ENST00000375703 FETUBQ9UGM5 382 aa15.27■□□□□ 0.04
MSH5-201ENST00000375703 CPSF3Q9UKF6 684 aaKnown RBP15.27■□□□□ 0.04
MSH5-201ENST00000375703 ZMYND8Q9ULU4 1186 aaPredicted RBP15.27■□□□□ 0.04
MSH5-201ENST00000375703 SPDYE16A6NNV3 312 aaPredicted RBP15.27■□□□□ 0.03
MSH5-201ENST00000375703 UBA1P22314 1058 aaKnown RBP15.27■□□□□ 0.03
MSH5-201ENST00000375703 PSMC1P62191 440 aaKnown RBP15.27■□□□□ 0.03
MSH5-201ENST00000375703 ZNF772Q68DY9 489 aaPredicted RBP15.27■□□□□ 0.03
MSH5-201ENST00000375703 BBS12Q6ZW61 710 aa15.27■□□□□ 0.03
MSH5-201ENST00000375703 AGGF1Q8N302 714 aaeCLIP15.27■□□□□ 0.036e-11■■□□□ 13.8
MSH5-201ENST00000375703 FBXO36Q8NEA4 188 aa15.27■□□□□ 0.03
MSH5-201ENST00000375703 C10orf82Q8WW14 230 aa15.27■□□□□ 0.03
MSH5-201ENST00000375703 MAF1Q9H063 256 aa15.27■□□□□ 0.03
MSH5-201ENST00000375703 TJP2Q9UDY2 1190 aa15.27■□□□□ 0.03
MSH5-201ENST00000375703 WDR91A4D1P6 747 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 FARP2O94887 1054 aaPredicted RBP15.26■□□□□ 0.03
MSH5-201ENST00000375703 PRKCBP05771 671 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 FGFR1P11362 822 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 ASPAP45381 313 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 GMPSP49915 693 aaPredicted RBP15.26■□□□□ 0.03
MSH5-201ENST00000375703 MAPK6Q16659 721 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 KLHL38Q2WGJ6 581 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 ZC3H12AQ5D1E8 599 aaKnown RBP15.26■□□□□ 0.03
MSH5-201ENST00000375703 IER5Q5VY09 327 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 UNC45BQ8IWX7 931 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 KCTD6Q8NC69 237 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 PAFAH2Q99487 392 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 LHX5Q9H2C1 402 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 PIM2Q9P1W9 311 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 PCSK1NQ9UHG2 260 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 CYTH4Q9UIA0 394 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 MED7O43513 233 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 CD48P09326 243 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 ATP2A2P16615 1042 aaKnown RBP15.26■□□□□ 0.03
MSH5-201ENST00000375703 OSTNP61366 133 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 LAMTOR4Q0VGL1 99 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 MTM1Q13496 603 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 BBS9Q3SYG4 887 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 EMC1Q8N766 993 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 RNF149Q8NC42 400 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 CHST13Q8NET6 341 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 INPP5DQ92835 1189 aa15.26■□□□□ 0.03
MSH5-201ENST00000375703 CAMKK2Q96RR4 588 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms