RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 NCOA4Q13772 614 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 HIC1Q14526 733 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 PLEKHG4Q58EX7 1191 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 TCHHL1Q5QJ38 904 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-204ENST00000375608 TTC16Q8NEE8 873 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 GSDMBQ8TAX9 411 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 SNRNP27Q8WVK2 155 aaKnown RBP14.39□□□□□ -0.11
MCF2L-204ENST00000375608 MIPEPQ99797 713 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 GINS2Q9Y248 185 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 DCCP43146 1447 aa14.39□□□□□ -0.11
MCF2L-204ENST00000375608 CREB3O43889 395 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ALADP13716 330 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ADSSP30520 456 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 NLRP11P59045 1033 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 PRKG1Q13976 671 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 MORF4L2Q15014 288 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 TKFCQ3LXA3 575 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 CDCA2Q69YH5 1023 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 DDX18Q9NVP1 670 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 PPP1R1BQ9UD71 204 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ZC3H7BQ9UGR2 993 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 FIS1Q9Y3D6 152 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 UBE4BO95155 1302 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 PHRF1Q9P1Y6 1649 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 KCNN4O15554 427 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 PSTPIP1O43586 416 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 CDK16Q00536 496 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 DSG1Q02413 1049 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 CUL2Q13617 745 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 UBAP2LQ14157 1087 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 TFDP3Q5H9I0 405 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 FNBP1LQ5T0N5 605 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ATG16L1Q676U5 607 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 CWF19L1Q69YN2 538 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 C16orf46Q6P387 395 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 RHBDF2Q6PJF5 856 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 POLNQ7Z5Q5 900 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 RNF148Q8N7C7 305 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 PPP4R1Q8TF05 950 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ZNF606Q8WXB4 792 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 FIZ1Q96SL8 496 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 SYT11Q9BT88 431 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 KCND2Q9NZV8 630 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 UMODL1Q5DID0 1318 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ECE2O60344 883 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 DGKIO75912 1065 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ZBED1O96006 694 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 OR6B2Q6IFH4 312 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 HHIPL2Q6UWX4 724 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 RIPOR1Q6ZS17 1223 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 WDR75Q8IWA0 830 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 GALNT4Q8N4A0 578 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ANKLE1Q8NAG6 615 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 GSTCDQ8NEC7 633 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 MIPOL1Q8TD10 442 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 ZNF333Q96JL9 665 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 SMYD2Q9NRG4 433 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 APOBEC2Q9Y235 224 aaKnown RBP14.38□□□□□ -0.11
MCF2L-204ENST00000375608 LRRC42Q9Y546 428 aa14.38□□□□□ -0.11
MCF2L-204ENST00000375608 SLC26A4O43511 780 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 GYS1P13807 737 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 EML3Q32P44 896 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 NPNTQ6UXI9 565 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 SLC9A9Q8IVB4 645 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 SH3TC2Q8TF17 1288 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 DEPDC1BQ8WUY9 529 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 HIC2Q96JB3 615 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 RIT2Q99578 217 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 WWP1Q9H0M0 922 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 VPS11Q9H270 941 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 GPATCH2LQ9NWQ4 482 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 LGALS13Q9UHV8 139 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 TRPM3Q9HCF6 1732 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-204ENST00000375608 POLRMTO00411 1230 aaKnown RBP14.37□□□□□ -0.11
MCF2L-204ENST00000375608 TCN1P20061 433 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-204ENST00000375608 MSX2P35548 267 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-204ENST00000375608 GDF10P55107 478 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 RPS6P62753 249 aaKnown RBP14.37□□□□□ -0.11
MCF2L-204ENST00000375608 USP4Q13107 963 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 PEX6Q13608 980 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 ACVR2BQ13705 512 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 LPCAT4Q643R3 524 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 IYDQ6PHW0 289 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 ABRAQ8N0Z2 381 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 C12orf50Q8NA57 414 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-204ENST00000375608 C7orf43Q8WVR3 580 aa14.37□□□□□ -0.11
MCF2L-204ENST00000375608 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
MCF2L-204ENST00000375608 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
MCF2L-204ENST00000375608 NEMP1O14524 444 aa14.36□□□□□ -0.11
MCF2L-204ENST00000375608 POLR2BP30876 1174 aaKnown RBP14.36□□□□□ -0.11
MCF2L-204ENST00000375608 MCL1Q07820 350 aa14.36□□□□□ -0.11
MCF2L-204ENST00000375608 BST1Q10588 318 aa14.36□□□□□ -0.11
MCF2L-204ENST00000375608 STX3Q13277 289 aa14.36□□□□□ -0.11
MCF2L-204ENST00000375608 SLC15A2Q16348 729 aa14.36□□□□□ -0.11
MCF2L-204ENST00000375608 C1orf220Q5T0J3 134 aa14.36□□□□□ -0.11
MCF2L-204ENST00000375608 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms