RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 SMYD3Q9H7B4 428 aa16.69■□□□□ 0.26
SDHB-201ENST00000375499 R3HCC1Q9Y3T6 440 aaKnown RBP16.69■□□□□ 0.26
SDHB-201ENST00000375499 DMDP11532 3685 aa16.69■□□□□ 0.26
SDHB-201ENST00000375499 CACNA1BQ00975 2339 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 CALUO43852 315 aaPredicted RBP16.68■□□□□ 0.26
SDHB-201ENST00000375499 LRRN2O75325 713 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 STAU1O95793 577 aaKnown RBP16.68■□□□□ 0.26
SDHB-201ENST00000375499 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 NR2F2P24468 414 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 PCSK1P29120 753 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 RAP1GAPP47736 663 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 BIRC3Q13489 604 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 TRPC3Q13507 836 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 NFIL3Q16649 462 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 ITIH5Q86UX2 942 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 CCDC47Q96A33 483 aaKnown RBP16.68■□□□□ 0.26
SDHB-201ENST00000375499 EEF2KMTQ96G04 330 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 LRRC3BQ96PB8 259 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 SDCBP2Q9H190 292 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 TRPV4Q9HBA0 871 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 ZFP14Q9HCL3 533 aa16.68■□□□□ 0.26
SDHB-201ENST00000375499 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
SDHB-201ENST00000375499 ZNF638Q14966 1978 aaKnown RBP16.68■□□□□ 0.26
SDHB-201ENST00000375499 MED19A0JLT2 244 aaPredicted RBP16.67■□□□□ 0.26
SDHB-201ENST00000375499 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 HEPACAM2A8MVW5 462 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 TACC1O75410 805 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 PRAMEF12O95522 483 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 SP9P0CG40 484 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 CDH8P55286 799 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 TNNC1P63316 161 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 NCOA4Q13772 614 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 VEPH1Q14D04 833 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 MLF2Q15773 248 aaPredicted RBP16.67■□□□□ 0.26
SDHB-201ENST00000375499 ZNF528Q3MIS6 628 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 ZACNQ401N2 412 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 CFAP221Q4G0U5 840 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 GPR158Q5T848 1215 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 SCARA5Q6ZMJ2 495 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 SPATA20Q8TB22 786 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 VRTNQ9H8Y1 702 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 ABCB6Q9NP58 842 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 TMEM30AQ9NV96 361 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 DLGAP2Q9P1A6 1054 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 CDH9Q9ULB4 789 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 PCDHA5Q9Y5H7 936 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 F5P12259 2224 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 CACNA1IQ9P0X4 2223 aa16.67■□□□□ 0.26
SDHB-201ENST00000375499 CEP250Q9BV73 2442 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 PHACTR2O75167 634 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 F11P03951 625 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 DCNP07585 359 aaKnown RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 GLULP15104 373 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 CD72P21854 359 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 BDNFP23560 247 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 PRCPP42785 496 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 PMS1P54277 932 aaKnown RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 CACNA2D1P54289 1103 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 NLRP12P59046 1061 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 STARD6P59095 220 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 SLC44A4Q53GD3 710 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 MDH1BQ5I0G3 518 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 SPOPLQ6IQ16 392 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 SV2AQ7L0J3 742 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 SPATA2LQ8IUW3 424 aaPredicted RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 ARID3BQ8IVW6 561 aaPredicted RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 OR6B3Q8NGW1 331 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 SYAP1Q96A49 352 aaPredicted RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 PCED1BQ96HM7 432 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 HINFPQ9BQA5 517 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 DDX23Q9BUQ8 820 aaKnown RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 SMG9Q9H0W8 520 aaKnown RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.269e-12■■■■■ 149.1
SDHB-201ENST00000375499 HEBP1Q9NRV9 189 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 MAGED2Q9UNF1 606 aaPredicted RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 FRMD4BQ9Y2L6 1034 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 MTF2Q9Y483 593 aaPredicted RBP16.66■□□□□ 0.26
SDHB-201ENST00000375499 R4GN57 208 aa16.66■□□□□ 0.26
SDHB-201ENST00000375499 TPRP12270 2363 aaKnown RBP16.65■□□□□ 0.26
SDHB-201ENST00000375499 WDR87Q6ZQQ6 2873 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 SLC38A8A6NNN8 435 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 ARNTLO00327 626 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 MAPK13O15264 365 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 KIF20AO95235 890 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 GDI1P31150 447 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 ATICP31939 592 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 GNL1P36915 607 aaPredicted RBP16.65■□□□□ 0.26
SDHB-201ENST00000375499 VAMP7P51809 220 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 SCN4BQ8IWT1 228 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 FAM186BQ8IYM0 893 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 RIN3Q8TB24 985 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 FUBP3Q96I24 572 aaKnown RBP eCLIP16.65■□□□□ 0.26
SDHB-201ENST00000375499 SLC46A2Q9BY10 475 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 OSBPL6Q9BZF3 934 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 HMGXB4Q9UGU5 601 aa16.65■□□□□ 0.26
SDHB-201ENST00000375499 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms