RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MYL3P08590 195 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 FAM86B2P0C5J1 330 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 AQP5P55064 265 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 CYP24A1Q07973 514 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 DCAF6Q58WW2 860 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 SPDYCQ5MJ68 293 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 APPL2Q8NEU8 664 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 TRIM62Q9BVG3 475 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 KIF9Q9HAQ2 790 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 PCDH9Q9HC56 1237 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 IRAK4Q9NWZ3 460 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 SLC39A10Q9ULF5 831 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 CDYLQ9Y232 598 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 C15orf41Q9Y2V0 281 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 AFF2P51816 1311 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ASB14A6NK59 587 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 TM9SF1O15321 606 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 SUPT3HO75486 399 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 BTKQ06187 659 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ASAP3Q8TDY4 903 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ZDHHC15Q96MV8 337 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 CCT7Q99832 543 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 EGFL8Q99944 293 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 MTMR12Q9C0I1 747 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ARHGEF38Q9NXL2 777 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 MYOM1P52179 1685 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ZBTB39O15060 712 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 SLITRK3O94933 977 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 RARRES1P49788 294 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 NUDT2P50583 147 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 CYLC2Q14093 348 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ANKRD27Q96NW4 1050 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 ILKAPQ9H0C8 392 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-203ENST00000375274 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
PTCH1-203ENST00000375274 DTNAQ9Y4J8 743 aa12.01□□□□□ -0.49
PTCH1-203ENST00000375274 MAGEB2O15479 319 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 PSMD3O43242 534 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ITGB3P05106 788 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 VCPP55072 806 aaKnown RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 ABCE1P61221 599 aaKnown RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 IRF2BP1Q8IU81 584 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ARHGEF19Q8IW93 802 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 C4orf19Q8IY42 314 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ABRAQ8N0Z2 381 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 INPP4AQ96PE3 977 aaPredicted RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 TMEM120AQ9BXJ8 343 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 DNAJC18Q9H819 358 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 NINJ2Q9NZG7 142 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 MAP4P27816 1152 aaKnown RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 RXRBP28702 533 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ACADSBP45954 432 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ALDH5A1P51649 535 aaPredicted RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 ZNF235Q14590 738 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 IL17AQ16552 155 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 CBWD6Q4V339 395 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 CBWD3Q5JTY5 395 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 CBWD5Q5RIA9 395 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ZNF772Q68DY9 489 aaPredicted RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 TSPAN17Q96FV3 270 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ASPSCR1Q9BZE9 553 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 NSMCE4AQ9NXX6 385 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 DNALI1O14645 258 aaPredicted RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 SNX3O60493 162 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 RARBP10826 455 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 PECAM1P16284 738 aaPredicted RBP12□□□□□ -0.49
PTCH1-203ENST00000375274 BGNP21810 368 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 HADHAP40939 763 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 KCNA1Q09470 495 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 C6orf10Q5SRN2 563 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 NUP93Q8N1F7 819 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 RMDN1Q96DB5 314 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 ELMO2Q96JJ3 720 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 NAT9Q9BTE0 207 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 GGA2Q9UJY4 613 aa12□□□□□ -0.49
PTCH1-203ENST00000375274 SHMT1P34896 483 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 NLRP11P59045 1033 aaKnown RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 EFHC1Q5JVL4 640 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 ERMARDQ5T6L9 678 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 EMC1Q8N766 993 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 ADNPQ9H2P0 1102 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 HACD3Q9P035 362 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 E7ENQ6 273 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 MTSS1O43312 755 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SKAP2O75563 359 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-203ENST00000375274 KRT16P08779 473 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 NAMPTP43490 491 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 OTOP1Q7RTM1 612 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 IQCKQ8N0W5 287 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 SCFD2Q8WU76 684 aa11.99□□□□□ -0.49
PTCH1-203ENST00000375274 CENPTQ96BT3 561 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms