RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SEM1Q6ZVN7 128 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 CBARPQ8N350 705 aaPredicted RBP5.6□□□□□ -1.51
PMS1-202ENST00000374826 PPM1NQ8N819 430 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 C1orf162Q8NEQ5 155 aaPredicted RBP5.6□□□□□ -1.51
PMS1-202ENST00000374826 IL17REQ8NFR9 667 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 CYFIP2Q96F07 1278 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 FUBP3Q96I24 572 aaKnown RBP eCLIP5.6□□□□□ -1.51
PMS1-202ENST00000374826 THUMPD2Q9BTF0 503 aaKnown RBP5.6□□□□□ -1.51
PMS1-202ENST00000374826 REXO4Q9GZR2 422 aaKnown RBP5.6□□□□□ -1.51
PMS1-202ENST00000374826 MANSC1Q9H8J5 431 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 MKS1Q9NXB0 559 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 CCNL1Q9UK58 526 aaPredicted RBP5.6□□□□□ -1.51
PMS1-202ENST00000374826 SPEF2Q9C093 1822 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 DLEC1Q9Y238 1755 aa5.6□□□□□ -1.51
PMS1-202ENST00000374826 FOSP01100 380 aaPredicted RBP5.59□□□□□ -1.51
PMS1-202ENST00000374826 CFIP05156 583 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 TMPOP42166 694 aaKnown RBP5.59□□□□□ -1.51
PMS1-202ENST00000374826 MXRA7P84157 204 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 SCAPQ12770 1279 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 SLC39A6Q13433 755 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 EPHA10Q5JZY3 1008 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 TSHZ3Q63HK5 1081 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 ZNF529Q6P280 563 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 FAM9BQ8IZU0 186 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 OR56A1Q8NGH5 318 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 RUNDC1Q96C34 613 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 MYOCQ99972 504 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 C7orf25Q9BPX7 421 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 DUSP26Q9BV47 211 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 PNNQ9H307 717 aaKnown RBP5.59□□□□□ -1.51
PMS1-202ENST00000374826 KLHL11Q9NVR0 708 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 FAM30AQ9NZY2 134 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 SLC23A1Q9UHI7 598 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 TRHDEQ9UKU6 1024 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 RUVBL1Q9Y265 456 aaKnown RBP5.59□□□□□ -1.51
PMS1-202ENST00000374826 TAF1P21675 1872 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 KIAA1551Q9HCM1 1747 aa5.59□□□□□ -1.51
PMS1-202ENST00000374826 APAF1O14727 1248 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 NDUFS2O75306 463 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 CDKL5O76039 1030 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 AMY1AP04745 511 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 MYBL2P10244 700 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 CDK11BP21127 795 aaKnown RBP5.58□□□□□ -1.52
PMS1-202ENST00000374826 RARRES1P49788 294 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 CDKN1CP49918 316 aaPredicted RBP5.58□□□□□ -1.52
PMS1-202ENST00000374826 GUCY2FP51841 1108 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 RIPK4P57078 832 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 NHLH1Q02575 133 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 MTM1Q13496 603 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 ITPK1Q13572 414 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 ZNF169Q14929 603 aaPredicted RBP5.58□□□□□ -1.52
PMS1-202ENST00000374826 UBXN2BQ14CS0 331 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 ABCB5Q2M3G0 1257 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 SYDE2Q5VT97 1194 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 GPR149Q86SP6 731 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 MAPKAPK5Q8IW41 473 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 SLC44A3Q8N4M1 653 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 ZGPATQ8N5A5 531 aaKnown RBP5.58□□□□□ -1.52
PMS1-202ENST00000374826 PNISRQ8TF01 805 aaKnown RBP5.58□□□□□ -1.52
PMS1-202ENST00000374826 JADE3Q92613 823 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 DPF2Q92785 391 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 FBXO34Q9NWN3 711 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 STK32BQ9NY57 414 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 SAP30BPQ9UHR5 308 aaKnown RBP5.58□□□□□ -1.52
PMS1-202ENST00000374826 INTUQ9ULD6 942 aa5.58□□□□□ -1.52
PMS1-202ENST00000374826 NRXN2Q9P2S2 1712 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 KCNQ3O43525 872 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 MATN4O95460 622 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 ELANEP08246 267 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 DDCP20711 480 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 GCSHP23434 173 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 SLC6A2P23975 617 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 WASP42768 502 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 ATP8B2P98198 1209 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 AMPD3Q01432 767 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 FOXF2Q12947 444 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 MTMR1Q13613 665 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 ACAP2Q15057 778 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 SP5Q6BEB4 398 aaPredicted RBP5.57□□□□□ -1.52
PMS1-202ENST00000374826 SMIM5Q71RC9 77 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 UBE3BQ7Z3V4 1068 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 RHOT1Q8IXI2 618 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 TTC5Q8N0Z6 440 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 TMEM132CQ8N3T6 1108 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 MTMR8Q96EF0 704 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 FAXDC2Q96IV6 333 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 Q96MF0 132 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 ZSWIM1Q9BR11 485 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 MIS18AQ9NYP9 233 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 TUBD1Q9UJT1 453 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 ARFGEF1Q9Y6D6 1849 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 KAT6AQ92794 2004 aa5.57□□□□□ -1.52
PMS1-202ENST00000374826 HEG1Q9ULI3 1381 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 A0A1B0GTW7 788 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 CCER2I3L3R5 266 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 HTATSF1O43719 755 aaKnown RBP5.56□□□□□ -1.52
PMS1-202ENST00000374826 ALAS1P13196 640 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 ITGB6P18564 788 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 C5AR1P21730 350 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 277.3 ms