RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 KRT73Q86Y46 540 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CABLES1Q8TDN4 633 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ADAMTS18Q8TE60 1221 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 EXOC2Q96KP1 924 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 AK8Q96MA6 479 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CINPQ9BW66 212 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 OSGEPL1Q9H4B0 414 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 HMX1Q9NP08 348 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 MBD2Q9UBB5 411 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 DBF4Q9UBU7 674 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 SEPT3Q9UH03 358 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 SLC39A10Q9ULF5 831 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 DNAJC16Q9Y2G8 782 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 TRBV23OR9-2A0A075B6M9 112 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 FAM47E-STBD1D6RA91 191 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 DOK2O60496 412 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ICMTO60725 284 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 KRT7P08729 469 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CPA2P48052 419 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CCT5P48643 541 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 DSC2Q02487 901 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ERV3-1Q14264 604 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 UBE3CQ15386 1083 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 BEND3Q5T5X7 828 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 KIAA0319Q5VV43 1072 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 SPECC1LQ69YQ0 1117 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 RAB11FIP2Q7L804 512 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 HDXQ7Z353 690 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ZBTB46Q86UZ6 589 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CNTD1Q8N815 330 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CHAC2Q8WUX2 184 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ATL1Q8WXF7 558 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ZUFSPQ96AP4 578 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 SLC22A18Q96BI1 424 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 TMEM68Q96MH6 324 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 FHDC1Q9C0D6 1143 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 DMAP1Q9NPF5 467 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 POLE3Q9NRF9 147 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 SAP30BPQ9UHR5 308 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 RGPD5Q99666 1765 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 PSMD9O00233 223 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 FRS3O43559 492 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ARF4P18085 180 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 TBXAS1P24557 533 aaPredicted RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 HMOX2P30519 316 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 HAND2P61296 217 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 EEF1A1P68104 462 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 EEF1A2Q05639 463 aaKnown RBP8.32□□□□□ -1.08
USP48-203ENST00000374732 SEPT6Q14141 434 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ACAP2Q15057 778 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ZNF423Q2M1K9 1284 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 MYLK3Q32MK0 819 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 EEF1A1P5Q5VTE0 462 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 PGM2L1Q6PCE3 622 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 SARM1Q6SZW1 724 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 KRT74Q7RTS7 529 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 CDH26Q8IXH8 852 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 OR6S1Q8NH40 331 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 ADAM19Q9H013 955 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 PDLIM7Q9NR12 457 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 SPEF1Q9Y4P9 236 aa8.32□□□□□ -1.08
USP48-203ENST00000374732 RAB19A4D1S5 217 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 UPP2O95045 317 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 BMP10O95393 424 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 F13A1P00488 732 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 CD46P15529 392 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 RAG1P15918 1043 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 OSBPP22059 807 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 CCR1P32246 355 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 SLC26A3P40879 764 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 STAT6P42226 847 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 HABP2Q14520 560 aaPredicted RBP8.31□□□□□ -1.08
USP48-203ENST00000374732 CBX2Q14781 532 aaPredicted RBP8.31□□□□□ -1.08
USP48-203ENST00000374732 MAPK6Q16659 721 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 ACCSLQ4AC99 568 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 PASD1Q8IV76 773 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 NIPA2Q8N8Q9 360 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 TEX47Q8TBZ9 253 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 COG1Q8WTW3 980 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 UBXN10Q96LJ8 280 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 HEMGNQ9BXL5 484 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 SLC35C2Q9NQQ7 365 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 STK38LQ9Y2H1 464 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 A0A087WZG4 1122 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 PNMA6EA0A0J9YXQ4 647 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 SSX5O60225 188 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 CHRM5P08912 532 aaPredicted RBP8.31□□□□□ -1.08
USP48-203ENST00000374732 CTSHP09668 335 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 ANXA8P13928 327 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 MX1P20591 662 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 ADAM17P78536 824 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 LACTBP83111 547 aaPredicted RBP8.31□□□□□ -1.08
USP48-203ENST00000374732 ARHGAP8P85298 464 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 SPARCL1Q14515 664 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.31□□□□□ -1.082e-9■■■■□ 20.9
USP48-203ENST00000374732 KLHL40Q2TBA0 621 aa8.31□□□□□ -1.08
USP48-203ENST00000374732 ZNF658Q5TYW1 1059 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms