RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 SENP7Q9BQF6 1050 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
PABPC4-201ENST00000372856 ZNF541Q9H0D2 1346 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 MAGEB2O15479 319 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 EDF1O60869 148 aaKnown RBP16.63■□□□□ 0.25
PABPC4-201ENST00000372856 LMNB2Q03252 620 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 GAD2Q05329 585 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 SFSWAPQ12872 951 aaKnown RBP16.63■□□□□ 0.25
PABPC4-201ENST00000372856 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 MAK16Q9BXY0 300 aaKnown RBP16.63■□□□□ 0.25
PABPC4-201ENST00000372856 LRMDAQ9H2I8 198 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 C12orf65Q9H3J6 166 aaKnown RBP16.63■□□□□ 0.25
PABPC4-201ENST00000372856 PRDM16Q9HAZ2 1276 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 SLC38A10Q9HBR0 1119 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 AGO2Q9UKV8 859 aaKnown RBP16.63■□□□□ 0.25
PABPC4-201ENST00000372856 SCINQ9Y6U3 715 aa16.63■□□□□ 0.25
PABPC4-201ENST00000372856 PRPF4O43172 522 aaKnown RBP eCLIP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 NR1H3Q13133 447 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 PSMD6Q15008 389 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 PDK4Q16654 411 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 RCOR2Q8IZ40 523 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 ALLCQ8N6M5 410 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 DTX3LQ8TDB6 740 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 HIC2Q96JB3 615 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 MCEEQ96PE7 176 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 PARVAQ9NVD7 372 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 SAE1Q9UBE0 346 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 LRCH1Q9Y2L9 728 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 NUB1Q9Y5A7 615 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 SGK1O00141 431 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 WFS1O76024 890 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 TJP3O95049 919 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 HNRNPCP07910 306 aaKnown RBP eCLIP16.62■□□□□ 0.253e-7■■□□□ 12
PABPC4-201ENST00000372856 T-ENOLP0DO92 83 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 HARSP12081 509 aaKnown RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 SKIP12755 728 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 EFTUD2Q15029 972 aaKnown RBP eCLIP16.62■□□□□ 0.253e-7■■■■□ 19.7
PABPC4-201ENST00000372856 WDR72Q3MJ13 1102 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 MTERF2Q49AM1 385 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 LVRNQ6Q4G3 990 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 PHF13Q86YI8 300 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 SCG3Q8WXD2 468 aaKnown RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 TTC25Q96NG3 672 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 FOXP3Q9BZS1 431 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 HAPLN2Q9GZV7 340 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 UBN1Q9NPG3 1134 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 ANKFY1Q9P2R3 1169 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 SUPT3HO75486 399 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 STBD1O95210 358 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 GSTA2P09210 222 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 KRT4P19013 534 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 EIF4BP23588 611 aaKnown RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 ERFP50548 548 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 DYNLT1P63172 113 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 ZNF252P-AS1Q0IIN9 211 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 ZNF394Q53GI3 561 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 TRIM72Q6ZMU5 477 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 TMEM143Q96AN5 459 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 ZNF333Q96JL9 665 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 TBC1D10AQ9BXI6 508 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 C17orf75Q9HAS0 396 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 RBAKQ9NYW8 714 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-201ENST00000372856 ARHGAP28Q9P2N2 729 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 IP6K2Q9UHH9 426 aa16.62■□□□□ 0.25
PABPC4-201ENST00000372856 SNX30Q5VWJ9 437 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 SPOCD1Q6ZMY3 1216 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 OTOAQ7RTW8 1153 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 OR5B17Q8NGF7 314 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 SLC7A6OSQ96CW6 309 aaPredicted RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 KLF6Q99612 283 aaPredicted RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 DENND2DQ9H6A0 471 aaPredicted RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 NPHS2Q9NP85 383 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 SMG5Q9UPR3 1016 aaKnown RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 RIPK3Q9Y572 518 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 GOLGA8RI6L899 631 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 WDR46O15213 610 aaKnown RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 DGAT1O75907 488 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 SSTR1P30872 391 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 PRKCEQ02156 737 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 OGDHQ02218 1023 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 DCUN1D2Q6PH85 259 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 TDRPQ86YL5 185 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 CCDC60Q8IWA6 550 aaPredicted RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 RNF168Q8IYW5 571 aaPredicted RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 C10orf82Q8WW14 230 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 ZNF606Q8WXB4 792 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 PTPRN2Q92932 1015 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 ATP6V0A1Q93050 837 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 AKT1S1Q96B36 256 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 VCPIP1Q96JH7 1222 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 IQCGQ9H095 443 aaKnown RBP16.61■□□□□ 0.25
PABPC4-201ENST00000372856 DCTN4Q9UJW0 460 aa16.61■□□□□ 0.25
PABPC4-201ENST00000372856 ALOX15BO15296 676 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms