RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ZC3H11AO75152 810 aaKnown RBP eCLIP12.29□□□□□ -0.442e-6■■□□□ 12.2
PTPN1-201ENST00000371621 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 KLHL2O95198 593 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 WDR4P57081 412 aaKnown RBP12.29□□□□□ -0.44
PTPN1-201ENST00000371621 ZCCHC7Q8N3Z6 543 aaKnown RBP12.29□□□□□ -0.44
PTPN1-201ENST00000371621 CDKL2Q92772 493 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 CENPOQ9BU64 300 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 DMTF1Q9Y222 760 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 ITM2BQ9Y287 266 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 PCDHB4Q9Y5E5 795 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 RPTORQ8N122 1335 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 ANKARQ7Z5J8 1434 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 KAT6AQ92794 2004 aa12.29□□□□□ -0.44
PTPN1-201ENST00000371621 CNOT3O75175 753 aaKnown RBP12.28□□□□□ -0.44
PTPN1-201ENST00000371621 MAP3K6O95382 1288 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 ECE1P42892 770 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 CHRNDQ07001 517 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 PEX6Q13608 980 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 ITGA9Q13797 1035 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 CCDC14Q49A88 953 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 CYP2R1Q6VVX0 501 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 POLNQ7Z5Q5 900 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 HACD3Q9P035 362 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 WHRNQ9P202 907 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 CIDEBQ9UHD4 219 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 FBXO9Q9UK97 447 aaPredicted RBP12.28□□□□□ -0.44
PTPN1-201ENST00000371621 CAB39Q9Y376 341 aaPredicted RBP12.28□□□□□ -0.44
PTPN1-201ENST00000371621 NRKQ7Z2Y5 1582 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 CRCPO75575 148 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 HNRNPH3P31942 346 aaKnown RBP12.28□□□□□ -0.44
PTPN1-201ENST00000371621 GSTO1P78417 241 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 MPP2Q14168 576 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 ALX1Q15699 326 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 XKR5Q6UX68 686 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 KCTD1Q719H9 257 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 FRMD5Q7Z6J6 570 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 HPS6Q86YV9 775 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 HSPH1Q92598 858 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 MECRQ9BV79 373 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 SLC17A7Q9P2U7 560 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 APEX2Q9UBZ4 518 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 MYRFQ9Y2G1 1151 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 AGLP35573 1532 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 AKAP3O75969 853 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 RRM1P23921 792 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 STT3AP46977 705 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 FMO5P49326 533 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 KRT76Q01546 638 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 SLC12A1Q13621 1099 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 MORF4L2Q15014 288 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 KLHL35Q6PF15 583 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 POTEAQ6S8J7 498 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 NEK10Q6ZWH5 1172 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 PARP8Q8N3A8 854 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
PTPN1-201ENST00000371621 CDRT15Q96T59 188 aa12.28□□□□□ -0.44
PTPN1-201ENST00000371621 KPNA4O00629 521 aaPredicted RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 GAS7O60861 476 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 TYK2P29597 1187 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 UBAP2Q5T6F2 1119 aaKnown RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 FAXCQ5TGI0 409 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 ATG14Q6ZNE5 492 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 KCTD6Q8NC69 237 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 FBXO36Q8NEA4 188 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 MTG1Q9BT17 334 aaPredicted RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 TMEM121Q9BTD3 319 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 WDR70Q9NW82 654 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 PKD2L2Q9NZM6 624 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 ZNF839A8K0R7 811 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 FBP2O00757 339 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 HLA-DOAP06340 250 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 GNAZP19086 355 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 EIF2AK2P19525 551 aaKnown RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 PDIA5Q14554 519 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 TAF5Q15542 800 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 HADHQ16836 314 aaKnown RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 CCDC153Q494R4 210 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 NKX2-3Q8TAU0 364 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 PDCD6IPQ8WUM4 868 aaKnown RBP12.27□□□□□ -0.44
PTPN1-201ENST00000371621 VPS50Q96JG6 964 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 CORO1BQ9BR76 489 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 BARHL2Q9NY43 387 aa12.27□□□□□ -0.44
PTPN1-201ENST00000371621 ADAMTS13Q76LX8 1427 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 APOA1P02647 267 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 APRTP07741 180 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 JAK1P23458 1154 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 TPTEP56180 551 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 LSM3P62310 102 aaKnown RBP12.27□□□□□ -0.45
PTPN1-201ENST00000371621 GRB10Q13322 594 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 TBC1D9BQ66K14 1250 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 PACS1Q6VY07 963 aa12.27□□□□□ -0.45
PTPN1-201ENST00000371621 NET1Q7Z628 596 aaPredicted RBP12.27□□□□□ -0.45
PTPN1-201ENST00000371621 POMGNT1Q8WZA1 660 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms