RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 RHOT1Q8IXI2 618 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 FAM126BQ8IXS8 530 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 ZDHHC14Q8IZN3 488 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 SENP8Q96LD8 212 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 DDX47Q9H0S4 455 aaKnown RBP18.51■□□□□ 0.55
SSBP3-203ENST00000371319 SYNCQ9H7C4 482 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 ARFGAP3Q9NP61 516 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 METTL5Q9NRN9 209 aaKnown RBP18.51■□□□□ 0.55
SSBP3-203ENST00000371319 TSC2P49815 1807 aa18.51■□□□□ 0.55
SSBP3-203ENST00000371319 CASTOR2A6NHX0 329 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 C9IYK1 514 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 F8VP50 259 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 GABRDO14764 452 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 GLI1P08151 1106 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 KRT3P12035 628 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 CCDC130P13994 396 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 HSPA6P17066 643 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 IBSPP21815 317 aaPredicted RBP18.5■□□□□ 0.55
SSBP3-203ENST00000371319 RFC1P35251 1148 aaPredicted RBP18.5■□□□□ 0.55
SSBP3-203ENST00000371319 AARSP49588 968 aaKnown RBP eCLIP18.5■□□□□ 0.554e-6■■■■■ 36.2
SSBP3-203ENST00000371319 GRIK3Q13003 919 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
SSBP3-203ENST00000371319 UPP1Q16831 310 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 WSCD1Q658N2 575 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 PMF1Q6P1K2 205 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 LRRC8DQ7L1W4 858 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 IPO4Q8TEX9 1081 aaKnown RBP18.5■□□□□ 0.55
SSBP3-203ENST00000371319 SLC35F5Q8WV83 523 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 HINFPQ9BQA5 517 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 PAAF1Q9BRP4 392 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 SLC4A5Q9BY07 1137 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 GDF3Q9NR23 364 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 OGDHLQ9ULD0 1010 aa18.5■□□□□ 0.55
SSBP3-203ENST00000371319 TCRBV7S2A1N4TA0A589 114 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 BHMG1C9JSJ3 638 aaPredicted RBP18.49■□□□□ 0.55
SSBP3-203ENST00000371319 E5RJQ4 531 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 GABBR2O75899 941 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 POMCP01189 267 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 MYBL2P10244 700 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 CCL5P13501 91 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 TCF4P15884 667 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 SELPP16109 830 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 TNFRSF8P28908 595 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 RGS7P49802 495 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 FAM189BP81408 668 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 SIX1Q15475 284 aaPredicted RBP18.49■□□□□ 0.55
SSBP3-203ENST00000371319 CD300LGQ6UXG3 332 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 FAM183BPQ6ZVS7 135 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 ADAT2Q7Z6V5 191 aaKnown RBP18.49■□□□□ 0.55
SSBP3-203ENST00000371319 KATNAL2Q8IYT4 538 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 FNIP1Q8TF40 1166 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 DEFB118Q96PH6 123 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 SLITRK6Q9H5Y7 841 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 HESX1Q9UBX0 185 aa18.49■□□□□ 0.55
SSBP3-203ENST00000371319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSBP3-203ENST00000371319 SART1O43290 800 aaKnown RBP18.48■□□□□ 0.55
SSBP3-203ENST00000371319 HEXIM1O94992 359 aaKnown RBP18.48■□□□□ 0.55
SSBP3-203ENST00000371319 MYCP01106 439 aaPredicted RBP18.48■□□□□ 0.55
SSBP3-203ENST00000371319 ADORA2BP29275 332 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 TKTP29401 623 aaKnown RBP18.48■□□□□ 0.55
SSBP3-203ENST00000371319 PDE4CQ08493 712 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 GPNMBQ14956 572 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 GSPT2Q8IYD1 628 aaKnown RBP18.48■□□□□ 0.55
SSBP3-203ENST00000371319 PRELID2Q8N945 189 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 ANKRD52Q8NB46 1076 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 STK32AQ8WU08 396 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 TNIP3Q96KP6 325 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 BEGAINQ9BUH8 593 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 DNAI2Q9GZS0 605 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 MIS12Q9H081 205 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 PLEKHA4Q9H4M7 779 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 ST7Q9NRC1 585 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 DNAH12Q6ZR08 3092 aa18.48■□□□□ 0.55
SSBP3-203ENST00000371319 GOLGA6L10A0A0M3HER8 536 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 PIK3R2O00459 728 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 FSCN2O14926 492 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 PSMA2P25787 234 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 RPL34P49207 117 aaKnown RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 TUSC3Q13454 348 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 LRRC38Q5VT99 294 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 KIAA0319Q5VV43 1072 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 OR6B2Q6IFH4 312 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 SLC24A5Q71RS6 500 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 TMEM110Q86TL2 294 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 ARFGAP1Q8N6T3 406 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 EMC1Q8N766 993 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 B3GALNT2Q8NCR0 500 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 INPP5FQ9Y2H2 1132 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 ZSCAN5CA6NGD5 496 aaPredicted RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 ATP8B1O43520 1251 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 NBNO60934 754 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 PHF2O75151 1096 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 ATP2C2O75185 946 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 SASH3O75995 380 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 EOMESO95936 686 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 RARAP10276 462 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 PTPN1P18031 435 aaKnown RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 ACAT1P24752 427 aaKnown RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 BCAT1P54687 386 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms