RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 R3HDM1Q15032 1099 aaKnown RBP23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 MTFR1Q15390 333 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 C2CD6Q53TS8 623 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 TDRD10Q5VZ19 366 aaKnown RBP23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 FAM129AQ9BZQ8 928 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 WDCPQ9H6R7 721 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 CAPN10Q9HC96 672 aa23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 C6orf203Q9P0P8 240 aaPredicted RBP23.04■■□□□ 1.28
TM9SF3-201ENST00000371142 KRT87PA6NCN2 255 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 TRIM49D1C9J1S8 452 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 CPT1AP50416 773 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 FBXO33Q7Z6M2 555 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 TPCN2Q8NHX9 752 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 MAFGO15525 162 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 S100A5P33763 92 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 SLITRK1Q96PX8 696 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 DEFB129Q9H1M3 183 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 EXOSC4Q9NPD3 245 aaKnown RBP23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 CENPAP49450 140 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 FUT11Q495W5 492 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 BLOC1S5Q8TDH9 187 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 SPASTQ9UBP0 616 aa23.03■■□□□ 1.28
TM9SF3-201ENST00000371142 HPCAP84074 193 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 KCTD10Q9H3F6 313 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 GPRC5CQ9NQ84 441 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 PNMA8BQ9ULN7 279 aaPredicted RBP23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 RSPH10B2B2RC85 870 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 XPO1O14980 1071 aaKnown RBP23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 RSPH10BP0C881 870 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 CENPPQ6IPU0 288 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 MTIF3Q9H2K0 278 aaKnown RBP23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 DDIT4Q9NX09 232 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 FAM107AO95990 144 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 UBTFL6P0CB48 400 aaPredicted RBP23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 OVGP1Q12889 678 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 KCNB2Q92953 911 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 WWOXQ9NZC7 414 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 PLIN5Q00G26 463 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 CDH18Q13634 790 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 RIBC1Q8N443 379 aaPredicted RBP23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 C17orf102A2RUQ5 167 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 DNAJC3Q13217 504 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 LAMC2Q13753 1193 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 SPON1Q9HCB6 807 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 IQGAP3Q86VI3 1631 aa23.02■■□□□ 1.28
TM9SF3-201ENST00000371142 CCDC159P0C7I6 412 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 ODC1P11926 461 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 CASP4P49662 377 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 NSL1Q96IY1 281 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 BLOC1S6Q9UL45 172 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 FAM111AQ96PZ2 611 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 RRN3P2A6NIE6 340 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 TGM2P21980 687 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 ATG4AQ8WYN0 398 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 SMAPO00193 183 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 IGF2BP3O00425 579 aaKnown RBP eCLIP23.01■■□□□ 1.273e-6■■■□□ 14.6
TM9SF3-201ENST00000371142 SLC13A5Q86YT5 568 aaPredicted RBP23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 VPS33BQ9H267 617 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 PALMDQ9NP74 551 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 NCF1BA6NI72 391 aaPredicted RBP23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 NCF1CA8MVU1 366 aaPredicted RBP23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 CYTH3O43739 400 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 NCF1P14598 390 aaPredicted RBP23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 PNPLA4P41247 253 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 ATP6V0D2Q8N8Y2 350 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 SYN2Q92777 582 aaPredicted RBP23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 CNDP1Q96KN2 507 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 MTMR12Q9C0I1 747 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 HPS5Q9UPZ3 1129 aa23.01■■□□□ 1.27
TM9SF3-201ENST00000371142 CETPP11597 493 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 HSD17B3P37058 310 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 KLC1Q07866 573 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 SLC9A5Q14940 896 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 LINC00523Q86TU6 105 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 GIMAP4Q9NUV9 329 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 CACNA2D2Q9NY47 1150 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 THPOP40225 353 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 CAPZA2P47755 286 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 NCALDP61601 193 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 SKOR1P84550 965 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 CASKIN2Q8WXE0 1202 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 ZKSCAN4Q969J2 545 aaPredicted RBP23■■□□□ 1.27
TM9SF3-201ENST00000371142 ZFP42Q96MM3 310 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 EVPLLA8MZ36 301 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 SKAP2O75563 359 aaPredicted RBP23■■□□□ 1.27
TM9SF3-201ENST00000371142 DDHD2O94830 711 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 PON1P27169 355 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 KCNT1Q5JUK3 1230 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 DAB2IPQ5VWQ8 1189 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 ARID3BQ8IVW6 561 aaPredicted RBP23■■□□□ 1.27
TM9SF3-201ENST00000371142 MMGT1Q8N4V1 131 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 NUDT12Q9BQG2 462 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 FBXO28Q9NVF7 368 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 STX7O15400 261 aaKnown RBP23■■□□□ 1.27
TM9SF3-201ENST00000371142 MTSS1O43312 755 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 YY1P25490 414 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 KLRK1P26718 216 aa23■■□□□ 1.27
TM9SF3-201ENST00000371142 NUDT2P50583 147 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms