RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 RALGPS1Q5JS13 557 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 NLRX1Q86UT6 975 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 ARHGAP18Q8N392 663 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 OLFM3Q96PB7 478 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 VPS11Q9H270 941 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 WRAP73Q9P2S5 460 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 ADGRA3Q8IWK6 1321 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 SYNJ2BP-COX16A0A087WUM0 186 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 EIF3DO15371 548 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 KRT37O76014 449 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 WFS1O76024 890 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 CYP3A4P08684 503 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 RBP3P10745 1247 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 FGFR1P11362 822 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 KCNA4P22459 653 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 GLRA2P23416 452 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 STAT2P52630 851 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 EIF3EP60228 445 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 IGBP1P78318 339 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 BST1Q10588 318 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 MTERF2Q49AM1 385 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 DEFB107AQ8IZN7 70 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 ZCCHC9Q8N567 271 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 WDR18Q9BV38 432 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 WDR11Q9BZH6 1224 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 KLHL4Q9C0H6 718 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 WWP1Q9H0M0 922 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 DMAP1Q9NPF5 467 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 MAN1C1Q9NR34 630 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 COX16Q9P0S2 106 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 ZMYM2Q9UBW7 1377 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 CAPN8A6NHC0 703 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 MCF2LO15068 1137 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 TBC1D12O60347 775 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 ATP6V1G1O75348 118 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 LYPLA1O75608 230 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 CLPTM1O96005 669 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 SHMT1P34896 483 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 PSMC5P62195 406 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 RPL10AP62906 217 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 TFAMQ00059 246 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 STX3Q13277 289 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 R3HDM1Q15032 1099 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 SLC5A9Q2M3M2 681 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 CDC42EP5Q6NZY7 148 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 RBM44Q6ZP01 1051 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 RAPH1Q70E73 1250 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 MARK2Q7KZI7 788 aaKnown RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 PTAR1Q7Z6K3 402 aaPredicted RBP10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 ULK2Q8IYT8 1036 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 CSRNP1Q96S65 589 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 SEPT10Q9P0V9 454 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 CCPG1Q9ULG6 757 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 PRR12Q9ULL5 1215 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 FRMPD4Q14CM0 1322 aa10.89□□□□□ -0.67
PRPF38B-201ENST00000370021 PROSCO94903 275 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 TOP3BO95985 862 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 RAG1P15918 1043 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 MX2P20592 715 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 CLEC16AQ2KHT3 1053 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 ATG16L1Q676U5 607 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 FAM196AQ6ZSG2 479 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SYDE1Q6ZW31 735 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 TMPRSS6Q8IU80 811 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 PGBD4Q96DM1 585 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 DCUN1D5Q9BTE7 237 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 STX18Q9P2W9 335 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 KBTBD13C9JR72 458 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SORBS2O94875 1100 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 ENO3P13929 434 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 PEX2P28328 305 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 MAPK10P53779 464 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 ACVR2BQ13705 512 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 TXNRD3NBQ6F5E7 133 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 CDR2LQ86X02 465 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 FAM71AQ8IYT1 594 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 HACE1Q8IYU2 909 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 USP13Q92995 863 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SRPK1Q96SB4 655 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SAR1AQ9NR31 198 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SEL1LQ9UBV2 794 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 DDTLA6NHG4 134 aaPredicted RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 E9PBE3 544 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 KLHL41O60662 606 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 VAV1P15498 845 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 ATP2B4P23634 1241 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SMARCA1P28370 1054 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 YWHABP31946 246 aaKnown RBP10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SLC1A1P43005 524 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 KRT81Q14533 505 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 WDR72Q3MJ13 1102 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 FNBP1LQ5T0N5 605 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 OR52E8Q6IFG1 317 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SPATA18Q8TC71 538 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 DEPDC1BQ8WUY9 529 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 ZNF212Q9UDV6 495 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 SLIT2O94813 1529 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms