RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 BIRC3Q13489 604 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 VEPH1Q14D04 833 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 PHLDB3Q6NSJ2 640 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 VITQ6UXI7 678 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 FAM186BQ8IYM0 893 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 ZSCAN18Q8TBC5 510 aaPredicted RBP21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 TAF4BQ92750 862 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 DDX23Q9BUQ8 820 aaKnown RBP21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 SDCBP2Q9H190 292 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 COL4A3Q01955 1670 aa21.95■■□□□ 1.1
SMNDC1-201ENST00000369592 SHISA7A6NL88 538 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 PI15O43692 258 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 STARD6P59095 220 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 RPL10AP62906 217 aaKnown RBP21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 MAPRE1Q15691 268 aaKnown RBP21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 DDR2Q16832 855 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 SGSM1Q2NKQ1 1148 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 ZNF699Q32M78 642 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 MYLPFQ96A32 169 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 ELMO3Q96BJ8 720 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 TRMT2BQ96GJ1 504 aaKnown RBP21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 PCED1BQ96HM7 432 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 SMYD3Q9H7B4 428 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 ARHGEF3Q9NR81 526 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 NXF1Q9UBU9 619 aaKnown RBP21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 MAN1B1Q9UKM7 699 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 CA14Q9ULX7 337 aa21.94■■□□□ 1.1
SMNDC1-201ENST00000369592 HLA-DRAP01903 254 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 TRIM49P0CI25 452 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 TRIM49CP0CI26 452 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 CSH1P0DML2 217 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 CSH2P0DML3 217 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 CD44P16070 742 aaKnown RBP21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 PTPN1P18031 435 aaKnown RBP21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 CDC25CP30307 473 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 VIPR2P41587 438 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 CDH8P55286 799 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 NLRP12P59046 1061 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 ZNF667Q5HYK9 610 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 SDHAF4Q5VUM1 108 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 ANKRD40Q6AI12 368 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 VSTM1Q6UX27 236 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 C4orf50Q6ZRC1 276 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 SPATA2LQ8IUW3 424 aaPredicted RBP21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 CEP295NLQ96MC4 621 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 LRRC3BQ96PB8 259 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 SNX25Q9H3E2 840 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 ATXN3LQ9H3M9 355 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 DPEP3Q9H4B8 488 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 TASP1Q9H6P5 420 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 TRPV5Q9NQA5 729 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 TMEM30AQ9NV96 361 aa21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 HOOK1Q9UJC3 728 aaKnown RBP21.93■■□□□ 1.1
SMNDC1-201ENST00000369592 SOBPA7XYQ1 873 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 ARNTLO00327 626 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 KINO60870 393 aaKnown RBP21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 TADA3O75528 432 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 GTF2H1P32780 548 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 SLC44A4Q53GD3 710 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 ARID3BQ8IVW6 561 aaPredicted RBP21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 MFSD6LQ8IWD5 586 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 STKLD1Q8NE28 680 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 OR6B3Q8NGW1 331 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 FAM200AQ8TCP9 573 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 EEF2KMTQ96G04 330 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 SPATA17Q96L03 361 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 SLC46A2Q9BY10 475 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 TBC1D17Q9HA65 648 aa21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 MAGEC2Q9UBF1 373 aaPredicted RBP21.92■■□□□ 1.1
SMNDC1-201ENST00000369592 TICRRQ7Z2Z1 1910 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 SLC38A8A6NNN8 435 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 CETN3O15182 167 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 PSMC3P17980 439 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 ASPAP45381 313 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 GCLMP48507 274 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 CYP4F8P98187 520 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 PFKPQ01813 784 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 FCHO2Q0JRZ9 810 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 MORC3Q14149 939 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 GPR158Q5T848 1215 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 FOXR2Q6PJQ5 311 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 B3GALNT2Q8NCR0 500 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 FLCNQ8NFG4 579 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 TAS1R2Q8TE23 839 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 DEPDC1BQ8WUY9 529 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 DNASE1L2Q92874 299 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 E2F7Q96AV8 911 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 BCO2Q9BYV7 579 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 MFSD1Q9H3U5 465 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 APOBEC3GQ9HC16 384 aaKnown RBP21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 TMEM8AQ9HCN3 771 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 OBP2AQ9NY56 170 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 DLGAP2Q9P1A6 1054 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 ZMYM5Q9UJ78 669 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 CACNA1AO00555 2505 aa21.91■■□□□ 1.1
SMNDC1-201ENST00000369592 HEPACAM2A8MVW5 462 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 PPP1R3GB7ZBB8 358 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 LRRN2O75325 713 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 KRT13P13646 458 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 BDNFP23560 247 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms