RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 FAM171BQ6P995 826 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 RNF168Q8IYW5 571 aaPredicted RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 DCP1BQ8IZD4 617 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 C1orf131Q8NDD1 294 aaKnown RBP13.04□□□□□ -0.32
TUBE1-202ENST00000368662 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 CRTAC1Q9NQ79 661 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 STRIP2Q9ULQ0 834 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
TUBE1-202ENST00000368662 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 KIF5CO60282 957 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 SOD2P04179 222 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 CCDC130P13994 396 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 KRT17Q04695 432 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 SMARCB1Q12824 385 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 IFI16Q16666 785 aaKnown RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 PKDCCQ504Y2 493 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 DENND1BQ6P3S1 775 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 C4orf50Q6ZRC1 276 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 MON1BQ7L1V2 547 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 ERICH1Q86X53 443 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 RHOT2Q8IXI1 618 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 MCOLN2Q8IZK6 566 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 BCL7CQ8WUZ0 217 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 SECISBP2LQ93073 1101 aaKnown RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 ATP2C2O75185 946 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 ADORA2BP29275 332 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 SSTR3P32745 418 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 NFE2Q16621 373 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 KIAA1841Q6NSI8 718 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 DDX53Q86TM3 631 aaKnown RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 FUKQ8N0W3 1084 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 WDTC1Q8N5D0 677 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 OR10T2Q8NGX3 314 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 IPO4Q8TEX9 1081 aaKnown RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 RFFLQ8WZ73 363 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 PCED1BQ96HM7 432 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 MED10Q9BTT4 135 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 DUSP16Q9BY84 665 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 CYLDQ9NQC7 956 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 AVENQ9NQS1 362 aaPredicted RBP13.03□□□□□ -0.32
TUBE1-202ENST00000368662 CHST7Q9NS84 486 aa13.03□□□□□ -0.32
TUBE1-202ENST00000368662 MYBPHLA2RUH7 354 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 FAM200BP0CF97 657 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 NPR3P17342 541 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 PDCLQ13371 301 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 TCEAL1Q15170 157 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 NYAP1Q6ZVC0 841 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 TTC30AQ86WT1 665 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 GPR65Q8IYL9 337 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 UBA3Q8TBC4 463 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 PIK3R5Q8WYR1 880 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 SMARCD1Q96GM5 515 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 PKMYT1Q99640 499 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 HERC2P3Q9BVR0 1158 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 ZCWPW1Q9H0M4 648 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 SYNCQ9H7C4 482 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 WDR35Q9P2L0 1181 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 UVRAGQ9P2Y5 699 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 SCINQ9Y6U3 715 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 NCANO14594 1321 aa13.02□□□□□ -0.33
TUBE1-202ENST00000368662 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 CYP1A2P05177 515 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 PLA2G4AP47712 749 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 NAP1L1P55209 391 aaKnown RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 FAM35AQ86V20 835 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 TRIM58Q8NG06 486 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 SLC35F5Q8WV83 523 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 ATRIPQ8WXE1 791 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 C18orf8Q96DM3 657 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 FUBP3Q96I24 572 aaKnown RBP eCLIP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 HSFY1Q96LI6 401 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 ALS2CR12Q96Q35 445 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 C11orf70Q9BRQ4 267 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 B3GNT5Q9BYG0 378 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 MRPL47Q9HD33 250 aaKnown RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 CNOT8Q9UFF9 292 aaKnown RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 TFR2Q9UP52 801 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 BACE2Q9Y5Z0 518 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 XPO1O14980 1071 aaKnown RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 LINC00271P0C7V0 271 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 ACADSBP45954 432 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 GABRB2P47870 512 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 GLUD2P49448 558 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 DSG1Q02413 1049 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 PDE4CQ08493 712 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 PTP4A2Q12974 167 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 C9orf50Q5SZB4 431 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms