RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ZNF638Q14966 1978 aaKnown RBP20.25■□□□□ 0.83
CKS1B-203ENST00000368439 KIF26AQ9ULI4 1882 aaPredicted RBP20.24■□□□□ 0.83
CKS1B-203ENST00000368439 NOL4O94818 638 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 TRIM49P0CI25 452 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 TRIM49CP0CI26 452 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 WEE1P30291 646 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 CDC25CP30307 473 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 PMS1P54277 932 aaKnown RBP20.24■□□□□ 0.83
CKS1B-203ENST00000368439 CDH8P55286 799 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 STARD6P59095 220 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 RPL10AP62906 217 aaKnown RBP20.24■□□□□ 0.83
CKS1B-203ENST00000368439 CYP4F8P98187 520 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 GRM2Q14416 872 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 ZNF667Q5HYK9 610 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 GPR158Q5T848 1215 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 ADSSL1Q8N142 457 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 PCED1BQ96HM7 432 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 MYRFLQ96LU7 910 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 PRRX2Q99811 253 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 DDX23Q9BUQ8 820 aaKnown RBP20.24■□□□□ 0.83
CKS1B-203ENST00000368439 TBC1D17Q9HA65 648 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 CHMP5Q9NZZ3 219 aa20.24■□□□□ 0.83
CKS1B-203ENST00000368439 MAGEC2Q9UBF1 373 aaPredicted RBP20.24■□□□□ 0.83
CKS1B-203ENST00000368439 MIA3Q5JRA6 1907 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 SHISA7A6NL88 538 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 SLC38A8A6NNN8 435 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 ASS1P00966 412 aaKnown RBP20.23■□□□□ 0.83
CKS1B-203ENST00000368439 CSH1P0DML2 217 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 CSH2P0DML3 217 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 PSMC3P17980 439 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 PTPN1P18031 435 aaKnown RBP20.23■□□□□ 0.83
CKS1B-203ENST00000368439 RAP1GAPP47736 663 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 NLRP12P59046 1061 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 PFKPQ01813 784 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 MAPRE1Q15691 268 aaKnown RBP20.23■□□□□ 0.83
CKS1B-203ENST00000368439 SGSM1Q2NKQ1 1148 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 SLC44A4Q53GD3 710 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 ANKRD40Q6AI12 368 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 ARID3BQ8IVW6 561 aaPredicted RBP20.23■□□□□ 0.83
CKS1B-203ENST00000368439 MFSD6LQ8IWD5 586 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 TAF4BQ92750 862 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 FAM122AQ96E09 287 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 EEF2KMTQ96G04 330 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 TRMT2BQ96GJ1 504 aaKnown RBP20.23■□□□□ 0.83
CKS1B-203ENST00000368439 LRRC3BQ96PB8 259 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 SLC46A2Q9BY10 475 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 SLITRK6Q9H5Y7 841 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 TASP1Q9H6P5 420 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 HOOK1Q9UJC3 728 aaKnown RBP20.23■□□□□ 0.83
CKS1B-203ENST00000368439 MAN1B1Q9UKM7 699 aa20.23■□□□□ 0.83
CKS1B-203ENST00000368439 CACNA1HO95180 2353 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 HEPACAM2A8MVW5 462 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 GALR2O43603 387 aaPredicted RBP20.22■□□□□ 0.83
CKS1B-203ENST00000368439 KINO60870 393 aaKnown RBP20.22■□□□□ 0.83
CKS1B-203ENST00000368439 TADA3O75528 432 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 HLA-DRAP01903 254 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 BMP6P22004 513 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 BDNFP23560 247 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 GCLMP48507 274 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 NHLH1Q02575 133 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 MLF2Q15773 248 aaPredicted RBP20.22■□□□□ 0.83
CKS1B-203ENST00000368439 TAF12Q16514 161 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 ARHGAP15Q53QZ3 475 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 MDH1BQ5I0G3 518 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 SPOPLQ6IQ16 392 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 VSTM1Q6UX27 236 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 GPIHBP1Q8IV16 184 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 DEPDC1BQ8WUY9 529 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 DNASE1L2Q92874 299 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 E2F7Q96AV8 911 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 TRMT61BQ9BVS5 477 aaKnown RBP20.22■□□□□ 0.83
CKS1B-203ENST00000368439 TMEM30AQ9NV96 361 aa20.22■□□□□ 0.83
CKS1B-203ENST00000368439 TRIM49BA6NDI0 452 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 A8MXQ7 604 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 ARNTLO00327 626 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 LRRN2O75325 713 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 PRAMEF12O95522 483 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 KRT13P13646 458 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 CD44P16070 742 aaKnown RBP20.21■□□□□ 0.83
CKS1B-203ENST00000368439 ASPAP45381 313 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 CACNA2D1P54289 1103 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 CYP27A1Q02318 531 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 PRKCQQ04759 706 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 FCHO2Q0JRZ9 810 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 SCARA5Q6ZMJ2 495 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 SCN4BQ8IWT1 228 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 TAS1R2Q8TE23 839 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 SPATA17Q96L03 361 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 B3GNT5Q9BYG0 378 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 GTPBP4Q9BZE4 634 aaKnown RBP20.21■□□□□ 0.83
CKS1B-203ENST00000368439 APOBEC3GQ9HC16 384 aaKnown RBP20.21■□□□□ 0.83
CKS1B-203ENST00000368439 DLGAP2Q9P1A6 1054 aa20.21■□□□□ 0.83
CKS1B-203ENST00000368439 MAGED2Q9UNF1 606 aaPredicted RBP20.21■□□□□ 0.83
CKS1B-203ENST00000368439 CETN3O15182 167 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 GDI1P31150 447 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 ISM2Q6H9L7 571 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 B3GALNT2Q8NCR0 500 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 CEP295NLQ96MC4 621 aa20.2■□□□□ 0.82
CKS1B-203ENST00000368439 GCNAQ96QF7 691 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms