RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 POTEJP0CG39 1038 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 MAP4K3Q8IVH8 894 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 ARHGAP18Q8N392 663 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 TMEM130Q8N3G9 435 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 C12orf50Q8NA57 414 aaPredicted RBP20.6■□□□□ 0.89
TRIM58-201ENST00000366481 HIPK4Q8NE63 616 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 PTPRN2Q92932 1015 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 TIPINQ9BVW5 301 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 MAK16Q9BXY0 300 aaKnown RBP20.6■□□□□ 0.89
TRIM58-201ENST00000366481 GALNT8Q9NY28 637 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 STX18Q9P2W9 335 aaKnown RBP20.6■□□□□ 0.89
TRIM58-201ENST00000366481 ARHGAP42A6NI28 874 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 P4HA2O15460 535 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 HADHBP55084 474 aaKnown RBP20.6■□□□□ 0.89
TRIM58-201ENST00000366481 DSG1Q02413 1049 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 CMPK2Q5EBM0 449 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 SYDE1Q6ZW31 735 aaPredicted RBP20.6■□□□□ 0.89
TRIM58-201ENST00000366481 CCDC60Q8IWA6 550 aaPredicted RBP20.6■□□□□ 0.89
TRIM58-201ENST00000366481 CLPTM1LQ96KA5 538 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 TMEM120AQ9BXJ8 343 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 ASCC2Q9H1I8 757 aaPredicted RBP20.6■□□□□ 0.89
TRIM58-201ENST00000366481 MANSC1Q9H8J5 431 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 PXMP2Q9NR77 195 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 TBC1D22BQ9NU19 505 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 EXOC7Q9UPT5 735 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 PCDHB4Q9Y5E5 795 aa20.6■□□□□ 0.89
TRIM58-201ENST00000366481 LIG4P49917 911 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 RPL7AP62424 266 aaKnown RBP20.59■□□□□ 0.89
TRIM58-201ENST00000366481 MAP7Q14244 749 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 C4orf19Q8IY42 314 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 RIBC1Q8N443 379 aaPredicted RBP20.59■□□□□ 0.89
TRIM58-201ENST00000366481 KCTD17Q8N5Z5 321 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 TTLL6Q8N841 843 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 TCP10LQ8TDR4 215 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 PREBQ9HCU5 417 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 PPARGC1AQ9UBK2 798 aaKnown RBP20.59■□□□□ 0.89
TRIM58-201ENST00000366481 NUMBLQ9Y6R0 609 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 LRRIQ4A6NIV6 560 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 TCEA3O75764 348 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 HLA-DRAP01903 254 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 FGFR1P11362 822 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 MUTP22033 750 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 YY1P25490 414 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 GPC3P51654 580 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 ARSEP51690 589 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 TAS1R3Q7RTX0 852 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 KLHL23Q8NBE8 558 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 ABTB1Q969K4 478 aaPredicted RBP20.59■□□□□ 0.89
TRIM58-201ENST00000366481 TUBB6Q9BUF5 446 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
TRIM58-201ENST00000366481 RNF146Q9NTX7 359 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 UVRAGQ9P2Y5 699 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 SAE1Q9UBE0 346 aaPredicted RBP20.59■□□□□ 0.89
TRIM58-201ENST00000366481 PLSCR1O15162 318 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 MAGEB2O15479 319 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 MYBPC2Q14324 1141 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 WDR72Q3MJ13 1102 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 ZNF568Q3ZCX4 644 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 OLFML2BQ68BL8 750 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 RASSF3Q86WH2 238 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 MCF2L2Q86YR7 1114 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 GPD1LQ8N335 351 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 POLR3FQ9H1D9 316 aaPredicted RBP20.59■□□□□ 0.89
TRIM58-201ENST00000366481 XPNPEP1Q9NQW7 623 aa20.59■□□□□ 0.89
TRIM58-201ENST00000366481 NR3C2P08235 984 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 KITP10721 976 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 SYCP2LQ5T4T6 812 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 CCDC110Q8TBZ0 833 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 GATA6Q92908 595 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 SPATA16Q9BXB7 569 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 SLC38A10Q9HBR0 1119 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 KRT82Q9NSB4 513 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 ZNF212Q9UDV6 495 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 PCDHA10Q9Y5I2 948 aa20.58■□□□□ 0.89
TRIM58-201ENST00000366481 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.58■□□□□ 0.88
TRIM58-201ENST00000366481 SIGLEC16A6NMB1 481 aa20.58■□□□□ 0.88
TRIM58-201ENST00000366481 TDRD10Q5VZ19 366 aaKnown RBP20.58■□□□□ 0.88
TRIM58-201ENST00000366481 DENND1AQ8TEH3 1009 aa20.58■□□□□ 0.88
TRIM58-201ENST00000366481 LNPEPQ9UIQ6 1025 aa20.58■□□□□ 0.88
TRIM58-201ENST00000366481 RPL26L1Q9UNX3 145 aaKnown RBP20.58■□□□□ 0.88
TRIM58-201ENST00000366481 IKBKGQ9Y6K9 419 aa20.58■□□□□ 0.88
TRIM58-201ENST00000366481 TRAFD1O14545 582 aaPredicted RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 MAPTP10636 758 aaKnown RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 DYNLT1P63172 113 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 SAMD7Q7Z3H4 446 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 C12orf56Q8IXR9 622 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 FLAD1Q8NFF5 587 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 OSBPL8Q9BZF1 889 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 IQCGQ9H095 443 aaKnown RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 APOBEC3GQ9HC16 384 aaKnown RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 SENP1Q9P0U3 644 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 SLC17A7Q9P2U7 560 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 MYPNQ86TC9 1320 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 A6NJR5 290 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 MYL2P10916 166 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 FSTL1Q12841 308 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 ALCAMQ13740 583 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 LIN52Q52LA3 116 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 BRDTQ58F21 947 aaPredicted RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 TXNRD3NBQ6F5E7 133 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms