RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SEC24CP53992 1094 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 MAATS1Q7Z4T9 603 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 APBB1IPQ7Z5R6 666 aaPredicted RBP14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 NT5DC4Q86YG4 428 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 ZNF606Q8WXB4 792 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 LINC01599Q8WXQ3 324 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 CPA5Q8WXQ8 436 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 CISHQ9NSE2 258 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 PCDHA3Q9Y5H8 950 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 FGGP02679 453 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 NFICP08651 508 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 ATICP31939 592 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 HPDP32754 393 aaPredicted RBP14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 CTNNA1P35221 906 aaKnown RBP14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 C1QBPQ07021 282 aaKnown RBP14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 DSC3Q14574 896 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 GLRA4Q5JXX5 417 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 RTN4RL1Q86UN2 441 aaPredicted RBP14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 CD302Q8IX05 232 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 OR2W6PQ8NHA6 318 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 GIMAP7Q8NHV1 300 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 CCDC26Q8TAB7 109 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 ALG3Q92685 438 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 ABHD8Q96I13 439 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 CHST12Q9NRB3 414 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 PARP2Q9UGN5 583 aa14.65□□□□□ -0.06
CSNK1E-201ENST00000359867 TMEM110-MUSTN1A8MSY1 372 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 SART1O43290 800 aaKnown RBP14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 LSM8O95777 96 aaKnown RBP14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 SLC1A1P43005 524 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 SKOR1P84550 965 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 HLTFQ14527 1009 aaKnown RBP eCLIP14.64□□□□□ -0.077e-7■■■□□ 14.7
CSNK1E-201ENST00000359867 DDX42Q86XP3 938 aaKnown RBP eCLIP14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 IQCKQ8N0W5 287 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 AP1M1Q9BXS5 423 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 ZNF518BQ9C0D4 1074 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 VRTNQ9H8Y1 702 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 MRPL47Q9HD33 250 aaKnown RBP14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 GOLGA6L10A0A0M3HER8 536 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 SPOPO43791 374 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 ASPAP45381 313 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 PLEKHG4Q58EX7 1191 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 JADE1Q6IE81 842 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 ZFP42Q96MM3 310 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 BCO2Q9BYV7 579 aa14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 CHORDC1Q9UHD1 332 aaPredicted RBP14.64□□□□□ -0.07
CSNK1E-201ENST00000359867 KLHL33A6NCF5 533 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 BHMG1C9JSJ3 638 aaPredicted RBP14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 RRM1P23921 792 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 ELF1P32519 619 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 AFF1P51825 1210 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 ZNF667Q5HYK9 610 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 CEP85LQ5SZL2 805 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 SEL1L2Q5TEA6 688 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 C1orf127Q8N9H9 656 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 ZMAT2Q96NC0 199 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 FAM124BQ9H5Z6 455 aaPredicted RBP14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 ADAM22Q9P0K1 906 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 SIX4Q9UIU6 781 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 ANAPC7Q9UJX3 599 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 PCDHGC3Q9UN70 934 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 PLAAQ9Y263 795 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 C2CD2Q9Y426 696 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 SCINQ9Y6U3 715 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 CAPN7Q9Y6W3 813 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 H0YHG0 523 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 MYO1FO00160 1098 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 RAG1P15918 1043 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 ATF7P17544 494 aaPredicted RBP14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 NR1D1P20393 614 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 LSP1P33241 339 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 SARNPP82979 210 aaKnown RBP14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 KRT35Q92764 455 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 VWCEQ96DN2 955 aa14.63□□□□□ -0.07
CSNK1E-201ENST00000359867 CCDC85CA6NKD9 419 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 CSF2RAP15509 400 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 YARSP54577 528 aaKnown RBP14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 RWDD2BP57060 319 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 PTP4A2Q12974 167 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 PLEKHA7Q6IQ23 1121 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 BTBD6Q96KE9 485 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 SNX27Q96L92 541 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 PLVAPQ9BX97 442 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 CD248Q9HCU0 757 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 A0A0U1RQF3 1178 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 STAU1O95793 577 aaKnown RBP14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 CFHP08603 1231 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 KRT19P08727 400 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 ITGA4P13612 1032 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 P4HA1P13674 534 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 CD58P19256 250 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 CDH5P33151 784 aaPredicted RBP14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 MLH1P40692 756 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 CUL1Q13616 776 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 TMEM132DQ14C87 1099 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 C7orf61Q8IZ16 206 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 TMEM35BQ8NCS4 154 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 CXorf38Q8TB03 319 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 SEPT8Q92599 483 aa14.62□□□□□ -0.07
CSNK1E-201ENST00000359867 N4BP2L2Q92802 583 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms