RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 ACAP3Q96P50 834 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 ZNF317Q96PQ6 595 aaPredicted RBP9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 CALN1Q9BXU9 219 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 VTA1Q9NP79 307 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 METTL5Q9NRN9 209 aaKnown RBP9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 HESX1Q9UBX0 185 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 ITGA11Q9UKX5 1188 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 KCNH4Q9UQ05 1017 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 NAALADL1Q9UQQ1 740 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 COL1A2P08123 1366 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 O00370 1275 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 PRPSAP2O60256 369 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 CDKN2BP42772 138 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 SPARCL1Q14515 664 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 KRT81Q14533 505 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 LRRC14Q15048 493 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 FAM187BQ17R55 369 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 ATP13A4Q4VNC1 1196 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 TNFAIP8L3Q5GJ75 292 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 FAM47CQ5HY64 1035 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 EEF1DP3Q658K8 133 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 TRAPPC12Q8WVT3 735 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 HPDLQ96IR7 371 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 TGS1Q96RS0 853 aaKnown RBP9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 PHACTR1Q9C0D0 580 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 SLC24A2Q9UI40 661 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 POLIQ9UNA4 740 aa9.78□□□□□ -0.84
GTF3C2-202ENST00000359541 FAM189A1O60320 539 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 PEX10O60683 326 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 INSRRP14616 1297 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 YARSP54577 528 aaKnown RBP9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 SETDB1Q15047 1291 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 PTPN20Q4JDL3 420 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 LACTB2Q53H82 288 aaPredicted RBP9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 HHATQ5VTY9 493 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 BBS12Q6ZW61 710 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 TRPM8Q7Z2W7 1104 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 MAGEB18Q96M61 343 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 HERPUD2Q9BSE4 406 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 XYLT2Q9H1B5 865 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 AGAP1Q9UPQ3 857 aa9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.77□□□□□ -0.84
GTF3C2-202ENST00000359541 RLFQ13129 1914 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 LACTBL1A8MY62 500 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 B4GALT5O43286 388 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 PECAM1P16284 738 aaPredicted RBP9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 ALDH3A1P30838 453 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 RFC1P35251 1148 aaPredicted RBP9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 CDC42EP1Q00587 391 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 OTUD4Q01804 1114 aaKnown RBP9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 OR6B2Q6IFH4 312 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 ARMCX2Q7L311 632 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 CDR2LQ86X02 465 aaPredicted RBP9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 GDAP1Q8TB36 358 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 ACTL9Q8TC94 416 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 TFAP2BQ92481 460 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 OPTNQ96CV9 577 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 BCO2Q9BYV7 579 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 PTPRHQ9HD43 1115 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 PSMC3IPQ9P2W1 217 aaPredicted RBP9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 ARL2BPQ9Y2Y0 163 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 SRCAPQ6ZRS2 3230 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 CFAP73A6NFT4 308 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 GPD1P21695 349 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 RAP1GAPP47736 663 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 EIF3EP60228 445 aaKnown RBP9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 JADE1Q6IE81 842 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 SPATA21Q7Z572 469 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 CCDC63Q8NA47 563 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 GPRC5AQ8NFJ5 357 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 FBF1Q8TES7 1133 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 CKAP2Q8WWK9 683 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 HSPH1Q92598 858 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 CDCA5Q96FF9 252 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 ADAM7Q9H2U9 754 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 RBPJLQ9UBG7 517 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 BARX2Q9UMQ3 279 aaPredicted RBP9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 C2CD2Q9Y426 696 aa9.77□□□□□ -0.85
GTF3C2-202ENST00000359541 A0A087WZ62 844 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 LGALS2P05162 132 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 NFICP08651 508 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 KDELR1P24390 212 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CALRP27797 417 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 STIP1P31948 543 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 SCTRP47872 440 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 GSCP56915 257 aaPredicted RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 SMTNL2Q2TAL5 461 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 DCAF4L1Q3SXM0 396 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 PPP1R15BQ5SWA1 713 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CCDC62Q6P9F0 684 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 PIGWQ7Z7B1 504 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 TDRPQ86YL5 185 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CEP120Q8N960 986 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 FDXACB1Q9BRP7 624 aaPredicted RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CNPY3Q9BT09 278 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 TMEM121Q9BTD3 319 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms