RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 CHI3L2Q15782 390 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 KDM6BO15054 1643 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 VCLP18206 1134 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 NAPEPLDQ6IQ20 393 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 PRR12Q9ULL5 1215 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 KLC1Q07866 573 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 EFL1Q7Z2Z2 1120 aaKnown RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZNF438Q7Z4V0 828 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZNF669Q96BR6 464 aaPredicted RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CST8O60676 142 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CAMK2GQ13555 558 aaPredicted RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 ICE2Q659A1 982 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 SH2D3CQ8N5H7 860 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 ATP6V0D2Q8N8Y2 350 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 GGA3Q9NZ52 723 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 EPHB2P29323 1055 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CACHD1Q5VU97 1274 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCDC60Q8IWA6 550 aaPredicted RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
LDLRAD4-201ENST00000359446 KCNA3P22001 575 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 GPC1P35052 558 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 SPON1Q9HCB6 807 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 KLK14Q9P0G3 267 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 RRN3P2A6NIE6 340 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 HBP1O60381 514 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 RNASEH1O60930 286 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 FOXO4P98177 505 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 DDX39BQ13838 428 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 CYP51A1Q16850 503 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 PSMA4P25789 261 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 MAGEA4P43358 317 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 PLIN5Q00G26 463 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 MANSC1Q9H8J5 431 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 NCF1BA6NI72 391 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 NCF1CA8MVU1 366 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 SLC2A3P11169 496 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 NCF1P14598 390 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 METTL16Q86W50 562 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 PHACTR4Q8IZ21 702 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 TRIM8Q9BZR9 551 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 RERGLQ9H628 205 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 ANXA9O76027 345 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 PBLDP30039 288 aaPredicted RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 ANXA11P50995 505 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 TRIM71Q2Q1W2 868 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 CLEC10AQ8IUN9 316 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 ERP27Q96DN0 273 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 MTERF3Q96E29 417 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 ERVK-10P10266 1014 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 NAB2Q15742 525 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 LUZP2Q86TE4 346 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 DPP3Q9NY33 737 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 SCAF8Q9UPN6 1271 aaKnown RBP13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 ITIH6Q6UXX5 1313 aa13.22□□□□□ -0.29
LDLRAD4-201ENST00000359446 C17orf102A2RUQ5 167 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 EIF3DO15371 548 aaKnown RBP eCLIP13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 STX7O15400 261 aaKnown RBP13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 STRNO43815 780 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 SLC25A27O95847 323 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 MLH1P40692 756 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 LAMC2Q13753 1193 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 TRIP10Q15642 601 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 SGSM3Q96HU1 749 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 DDIT4Q9NX09 232 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 FAM47E-STBD1D6RA91 191 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 B3GAT3O94766 335 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 PDHBP11177 359 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 COMTP21964 271 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 PNPLA4P41247 253 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 LRRC8DQ7L1W4 858 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 MIER2Q8N344 545 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 GJD4Q96KN9 370 aaPredicted RBP13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 CCT7Q99832 543 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 VPS33BQ9H267 617 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 STMN3Q9NZ72 180 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 SEPT3Q9UH03 358 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 CETPP11597 493 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 YY1P25490 414 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 GRK3P35626 688 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 PLCL1Q15111 1095 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 SETD3Q86TU7 594 aaPredicted RBP13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 UNC45BQ8IWX7 931 aa13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 ZNF473Q8WTR7 871 aaKnown RBP13.21□□□□□ -0.29
LDLRAD4-201ENST00000359446 GLT1D1Q96MS3 346 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms