RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CASP5P51878 434 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 CBWD6Q4V339 395 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 CBWD3Q5JTY5 395 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 CBWD5Q5RIA9 395 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 EP400NLQ6ZTU2 488 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 OTOP1Q7RTM1 612 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 C4orf19Q8IY42 314 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 TEX9Q8N6V9 391 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 PDCD2LQ9BRP1 358 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
VCP-201ENST00000358901 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.28□□□□□ -0.12
VCP-201ENST00000358901 TMEM150BA6NC51 233 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 RNF225M0QZC1 329 aaPredicted RBP14.28□□□□□ -0.12
VCP-201ENST00000358901 AP3B1O00203 1094 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 LRRC55Q6ZSA7 311 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 MCOLN2Q8IZK6 566 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 RNF217Q8TC41 542 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 TRIM62Q9BVG3 475 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
VCP-201ENST00000358901 CPB1P15086 417 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 EPHB2P29323 1055 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 RECQLP46063 649 aaPredicted RBP14.28□□□□□ -0.12
VCP-201ENST00000358901 CLCN3P51790 818 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 AMHR2Q16671 573 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 TTMPQ5BVD1 217 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 GLRA4Q5JXX5 417 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 SPIRE2Q8WWL2 714 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 ZKSCAN4Q969J2 545 aaPredicted RBP14.28□□□□□ -0.12
VCP-201ENST00000358901 THAP11Q96EK4 314 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 CEP19Q96LK0 163 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 RNF181Q9P0P0 153 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 USP20Q9Y2K6 914 aa14.28□□□□□ -0.12
VCP-201ENST00000358901 ZBTB24O43167 697 aaPredicted RBP14.27□□□□□ -0.12
VCP-201ENST00000358901 TLR2O60603 784 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 CTSHP09668 335 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 IL1R1P14778 569 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 RANBP1P43487 201 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 NAMPTP43490 491 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 SKOR1P84550 965 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 IL17AQ16552 155 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 EFHC1Q5JVL4 640 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 SUGP1Q8IWZ8 645 aaKnown RBP14.27□□□□□ -0.12
VCP-201ENST00000358901 SYTL5Q8TDW5 730 aaPredicted RBP14.27□□□□□ -0.12
VCP-201ENST00000358901 CES2O00748 559 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 GNL1P36915 607 aaPredicted RBP14.27□□□□□ -0.12
VCP-201ENST00000358901 GRIK1P39086 918 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 ACADSBP45954 432 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 BTKQ06187 659 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 TRADDQ15628 312 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 DAB2IPQ5VWQ8 1189 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 C16orf89Q6UX73 402 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 NOP9Q86U38 636 aaKnown RBP14.27□□□□□ -0.12
VCP-201ENST00000358901 ABRAQ8N0Z2 381 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 ASIC4Q96FT7 647 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 TJP2Q9UDY2 1190 aa14.27□□□□□ -0.12
VCP-201ENST00000358901 MROH2AA6NES4 1674 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 SUPT3HO75486 399 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 GH1P01241 217 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 CD4P01730 458 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 PPATQ06203 517 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 INPP5AQ14642 412 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 ACOT1Q86TX2 421 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 C2orf69Q8N8R5 385 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 KAT5Q92993 513 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 RXFP1Q9HBX9 757 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 FAM8A1Q9UBU6 413 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 ATP6V1B1P15313 513 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.13
VCP-201ENST00000358901 C4orf22Q6V702 233 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 CHST13Q8NET6 341 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 TFB1MQ8WVM0 346 aaKnown RBP14.27□□□□□ -0.13
VCP-201ENST00000358901 ZNF606Q8WXB4 792 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 CCDC134Q9H6E4 229 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 SLC24A2Q9UI40 661 aa14.27□□□□□ -0.13
VCP-201ENST00000358901 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 MROH1Q8NDA8 1641 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 ZNF189O75820 626 aaPredicted RBP14.26□□□□□ -0.13
VCP-201ENST00000358901 TGM2P21980 687 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 AQP5P55064 265 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 SZRD1Q7Z422 152 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 SLC25A41Q8N5S1 370 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 CGRRF1Q99675 332 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 DCLK3Q9C098 648 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 CDYLQ9Y232 598 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 ZNF711Q9Y462 761 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 TISP43B9A030 160 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 PIK3CDO00329 1044 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 TRAPPC3O43617 180 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 SUPT20HL2P0C7V6 817 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 ZCCHC18P0CG32 403 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 NCAM1P13591 858 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 NUDT2P50583 147 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 IRX1P78414 480 aaPredicted RBP14.26□□□□□ -0.13
VCP-201ENST00000358901 BMPR2Q13873 1038 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 FLOT2Q14254 428 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 SLC26A11Q86WA9 606 aa14.26□□□□□ -0.13
VCP-201ENST00000358901 PCYOX1LQ8NBM8 494 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms