RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NFE2Q16621 373 aaPredicted RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 TCEAL5Q5H9L2 206 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 DRC7Q8IY82 874 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 TTC9BQ8N6N2 239 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 SPC24Q8NBT2 197 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 ZNF397Q8NF99 534 aaPredicted RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 MYLIPQ8WY64 445 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 GAS2L1Q99501 681 aaPredicted RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 CDX2Q99626 313 aaPredicted RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 AFF4Q9UHB7 1163 aaKnown RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 HCFC2Q9Y5Z7 792 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 GLUD1P00367 558 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 CYP11B1P15538 503 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 BDNFP23560 247 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 RBM10P98175 930 aaKnown RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 SMARCB1Q12824 385 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 DUSP4Q13115 394 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 DUSP6Q16828 381 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 SGO2Q562F6 1265 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 TPGS2Q68CL5 300 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 SMYD5Q6GMV2 418 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 IRF2BP2Q7Z5L9 587 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 SPATA2LQ8IUW3 424 aaPredicted RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 ZNF606Q8WXB4 792 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 GUCD1Q96NT3 240 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 ZNF518BQ9C0D4 1074 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 DNAI2Q9GZS0 605 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 IGFLR1Q9H665 355 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 AIPL1Q9NZN9 384 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 TSPAN16Q9UKR8 245 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 KIAA1257Q9ULG3 409 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 SLC27A5Q9Y2P5 690 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 PCDHB5Q9Y5E4 795 aa15.79■□□□□ 0.12
CCNE1-202ENST00000357943 PRRC2BQ5JSZ5 2229 aaKnown RBP15.79■□□□□ 0.12
CCNE1-202ENST00000357943 O00370 1275 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 THAP12O43422 761 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 MFAP3LO75121 409 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 SEC24AO95486 1093 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 CFHP08603 1231 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 TPM1P09493 284 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 EPCAMP16422 314 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 CYP2F1P24903 491 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 ADORA2BP29275 332 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 CACNA2D1P54289 1103 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 BPIFB4P59827 614 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 HYAL1Q12794 435 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 CFAP221Q4G0U5 840 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 SFMBT2Q5VUG0 894 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 ARHGAP17Q68EM7 881 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 LLGL2Q6P1M3 1020 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 C4orf50Q6ZRC1 276 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 NOP9Q86U38 636 aaKnown RBP15.78■□□□□ 0.12
CCNE1-202ENST00000357943 FAM35AQ86V20 835 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 SPPL2BQ8TCT7 592 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 EPS8L1Q8TE68 723 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 SLC22A17Q8WUG5 538 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 PPP2R3CQ969Q6 453 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 HNRNPABQ99729 332 aaKnown RBP15.78■□□□□ 0.12
CCNE1-202ENST00000357943 MED10Q9BTT4 135 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 CYP4F11Q9HBI6 524 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 TMEM30AQ9NV96 361 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 FBXW11Q9UKB1 542 aa15.78■□□□□ 0.12
CCNE1-202ENST00000357943 AKR1B15C9JRZ8 316 aaPredicted RBP15.77■□□□□ 0.12
CCNE1-202ENST00000357943 SOAT2O75908 522 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 FERP16591 822 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 PDE6CP51160 858 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 KCNC3Q14003 757 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 TAF3Q5VWG9 929 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 MICALL1Q8N3F8 863 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 TC2NQ8N9U0 490 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 VN1R2Q8NFZ6 395 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 C2orf15Q8WU43 125 aaKnown RBP15.77■□□□□ 0.12
CCNE1-202ENST00000357943 SLC20A1Q8WUM9 679 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 DDX1Q92499 740 aaKnown RBP15.77■□□□□ 0.12
CCNE1-202ENST00000357943 FUBP3Q96I24 572 aaKnown RBP eCLIP15.77■□□□□ 0.12
CCNE1-202ENST00000357943 NUCKS1Q9H1E3 243 aaKnown RBP15.77■□□□□ 0.12
CCNE1-202ENST00000357943 ABHD10Q9NUJ1 306 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 MTMR10Q9NXD2 777 aa15.77■□□□□ 0.12
CCNE1-202ENST00000357943 UNC80Q8N2C7 3258 aa15.77■□□□□ 0.11
CCNE1-202ENST00000357943 C5orf42Q9H799 3197 aa15.77■□□□□ 0.11
CCNE1-202ENST00000357943 BEST1O76090 585 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 ELF1P32519 619 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 CNGA2Q16280 664 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 ASIC2Q16515 512 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 GOLGA7BQ2TAP0 167 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 MGAT5BQ3V5L5 792 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 LCLAT1Q6UWP7 414 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 TTC30AQ86WT1 665 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 CNGA4Q8IV77 575 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 KREMEN2Q8NCW0 462 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 DNAJC7Q99615 494 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 CDCA3Q99618 268 aaPredicted RBP15.76■□□□□ 0.11
CCNE1-202ENST00000357943 SEPT5Q99719 369 aaPredicted RBP15.76■□□□□ 0.11
CCNE1-202ENST00000357943 ABCB6Q9NP58 842 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 MAN1C1Q9NR34 630 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 KRT82Q9NSB4 513 aa15.76■□□□□ 0.11
CCNE1-202ENST00000357943 NOCTQ9UK39 431 aaKnown RBP15.76■□□□□ 0.11
CCNE1-202ENST00000357943 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCNE1-202ENST00000357943 PRRG1O14668 218 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms