RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 LILRA6Q6PI73 481 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SASS6Q6UVJ0 657 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CCDC149Q6ZUS6 474 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SV2AQ7L0J3 742 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 FAM114A1Q8IWE2 563 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 THEM5Q8N1Q8 247 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PDCL2Q8N4E4 241 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SMRP1Q8NCR6 262 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CCDC150Q8NCX0 1101 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 C2orf15Q8WU43 125 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 FAXDC2Q96IV6 333 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 POP1Q99575 1024 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 IMPG2Q9BZV3 1241 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 ZCWPW1Q9H0M4 648 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 XYLT2Q9H1B5 865 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 THAP9Q9H5L6 903 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CYLDQ9NQC7 956 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PRDM6Q9NQX0 595 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TMEM63CQ9P1W3 806 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 AFF4Q9UHB7 1163 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CDY1Q9Y6F8 540 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CHD9Q3L8U1 2897 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 WDR27A2RRH5 827 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 GABRDO14764 452 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 P4HA2O15460 535 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 ADAM12O43184 909 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 MBTPS2O43462 519 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TACC1O75410 805 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 LETM1O95202 739 aaPredicted RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 ASS1P00966 412 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CPB1P15086 417 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 OR1D2P34982 312 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PTGIRP43119 386 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 LHX1P48742 406 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 NOP14P78316 857 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 DLG4P78352 724 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TSPY1Q01534 308 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PTSQ03393 145 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PPP3CAQ08209 521 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 PLD1Q13393 1074 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TPD52L1Q16890 204 aaPredicted RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SGSM1Q2NKQ1 1148 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SKOR2Q2VWA4 1001 aaPredicted RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 RARS2Q5T160 578 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TCERG1LQ5VWI1 586 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SYCE2Q6PIF2 218 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 OSTM1Q86WC4 334 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TRIM59Q8IWR1 403 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 DCP1BQ8IZD4 617 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 KREMEN2Q8NCW0 462 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SUSD6Q92537 303 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SLC35C1Q96A29 364 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 CNOT6LQ96LI5 555 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 RIPOR3Q96MK2 946 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 NECTIN4Q96NY8 510 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 RTP3Q9BQQ7 232 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 NIF3L1Q9GZT8 377 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 ZMYND15Q9H091 742 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 FAM124BQ9H5Z6 455 aaPredicted RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 ZNF395Q9H8N7 513 aaPredicted RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 HSFX1Q9UBD0 423 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 COQ4Q9Y3A0 265 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 TIMM13Q9Y5L4 95 aaPredicted RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 SNX9Q9Y5X1 595 aa4.25□□□□□ -1.73
CNOT4-202ENST00000356162 RANBP2P49792 3224 aaKnown RBP4.25□□□□□ -1.73
CNOT4-202ENST00000356162 MTMR11A4FU01 709 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 H3BQ06 376 aaPredicted RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 XYLBO75191 536 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 ABLIM3O94929 683 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 C8AP07357 584 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 LORP23490 312 aaPredicted RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 ELF1P32519 619 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 GCLMP48507 274 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 FMO5P49326 533 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 TYRO3Q06418 890 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 DLX2Q07687 328 aaPredicted RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 GPR17Q13304 367 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 SMAD2Q15796 467 aaKnown RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 UVSSAQ2YD98 709 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 PPM1LQ5SGD2 360 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 CAVIN1Q6NZI2 390 aaKnown RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 RSPO2Q6UXX9 243 aaPredicted RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 EP400NLQ6ZTU2 488 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 GLYCTKQ8IVS8 523 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 TCEAL8Q8IYN2 117 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 TTC39CQ8N584 583 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 FBXL13Q8NEE6 735 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 OR10T2Q8NGX3 314 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 RNF217Q8TC41 542 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 ENOX1Q8TC92 643 aaKnown RBP4.24□□□□□ -1.73
CNOT4-202ENST00000356162 SPPL2BQ8TCT7 592 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 TAS1R2Q8TE23 839 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 KBTBD7Q8WVZ9 684 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 ZNF592Q92610 1267 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 ASB2Q96Q27 587 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 PKMYT1Q99640 499 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 SYT15Q9BQS2 421 aa4.24□□□□□ -1.73
CNOT4-202ENST00000356162 ACBD6Q9BR61 282 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms