RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 VPS9D1Q9Y2B5 631 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 KCNK16Q96T55 309 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 PRPF18Q99633 342 aaKnown RBP18.75■□□□□ 0.59
COL18A1-202ENST00000355480 VPS33BQ9H267 617 aa18.75■□□□□ 0.59
COL18A1-202ENST00000355480 C2orf81A6NN90 581 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 CCZ1BP86790 482 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 CCZ1P86791 482 aaPredicted RBP18.74■□□□□ 0.59
COL18A1-202ENST00000355480 TTLL9Q3SXZ7 439 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 TMCO5AQ8N6Q1 288 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 HES6Q96HZ4 224 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 ZFP42Q96MM3 310 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 OLFM3Q96PB7 478 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 TRMT6Q9UJA5 497 aaKnown RBP18.74■□□□□ 0.59
COL18A1-202ENST00000355480 CYB561D2O14569 222 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 ZC3H11AO75152 810 aaKnown RBP eCLIP18.74■□□□□ 0.597e-16■□□□□ 8.1
COL18A1-202ENST00000355480 SOAT2O75908 522 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 VTNP04004 478 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 TCN1P20061 433 aaPredicted RBP18.74■□□□□ 0.59
COL18A1-202ENST00000355480 NCALDP61601 193 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 UGT3A1Q6NUS8 523 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 MPZL3Q6UWV2 235 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 CD302Q8IX05 232 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 IL1RL2Q9HB29 575 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 ADARB2Q9NS39 739 aaKnown RBP18.74■□□□□ 0.59
COL18A1-202ENST00000355480 QRICH2Q9H0J4 1663 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 KLHL2O95198 593 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 GEMP55040 296 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 BACE1P56817 501 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 C9orf131Q5VYM1 1079 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 LRRC8BQ6P9F7 803 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 EFL1Q7Z2Z2 1120 aaKnown RBP18.74■□□□□ 0.59
COL18A1-202ENST00000355480 LONP2Q86WA8 852 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 TC2NQ8N9U0 490 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 UCMAQ8WVF2 138 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 EPN3Q9H201 632 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 USP15Q9Y4E8 981 aaPredicted RBP18.74■□□□□ 0.59
COL18A1-202ENST00000355480 TBC1D4O60343 1298 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 GYPCP04921 128 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 SUPT20HL2P0C7V6 817 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 LVRNQ6Q4G3 990 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 USP13Q92995 863 aaPredicted RBP18.74■□□□□ 0.59
COL18A1-202ENST00000355480 WNK4Q96J92 1243 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 MROH8Q9H579 483 aa18.74■□□□□ 0.59
COL18A1-202ENST00000355480 EGFRP00533 1210 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CKMP06732 381 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 KLRC1P26715 233 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 NAMPTP43490 491 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 LRRC36Q1X8D7 754 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 DAGLBQ8NCG7 672 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CAPN10Q9HC96 672 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 GID8Q9NWU2 228 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 HOXA2O43364 376 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-202ENST00000355480 BFSP2Q13515 415 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 FAXCQ5TGI0 409 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 LZTS3O60299 673 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-202ENST00000355480 FDFT1P37268 417 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 COILP38432 576 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-202ENST00000355480 GRIN1Q05586 938 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 FAM83EQ2M2I3 478 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CCNI2Q6ZMN8 369 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-202ENST00000355480 HORMAD1Q86X24 394 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 ANKS1AQ92625 1134 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 EME1Q96AY2 570 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 SGF29Q96ES7 293 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 ERP44Q9BS26 406 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 THAP2Q9H0W7 228 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 PHF20L1A8MW92 1017 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 TP53BP2Q13625 1128 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 YME1L1Q96TA2 773 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 NMRK2Q9NPI5 230 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CDC42BPBQ9Y5S2 1711 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 EVPLLA8MZ36 301 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 H2AFYO75367 372 aaKnown RBP18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CENPPQ6IPU0 288 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 DENND5BQ6ZUT9 1274 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CARNMT1Q8N4J0 409 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 SYN2Q92777 582 aaPredicted RBP18.73■□□□□ 0.59
COL18A1-202ENST00000355480 POLLQ9UGP5 575 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CDY2AQ9Y6F7 541 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 CDY1Q9Y6F8 540 aa18.73■□□□□ 0.59
COL18A1-202ENST00000355480 ARHGEF9O43307 516 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 DGKIO75912 1065 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 TGM2P21980 687 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ADGRF2Q8IZF7 708 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CYGBQ8WWM9 190 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CMTM5Q96DZ9 223 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CPB2Q96IY4 423 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 MRGBPQ9NV56 204 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 GTF3C4Q9UKN8 822 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 VWA5AO00534 786 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 ALOX15P16050 662 aaPredicted RBP18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CLEC16AQ2KHT3 1053 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 CBWD2Q8IUF1 395 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 TMEM120BA0PK00 339 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 URODP06132 367 aa18.72■□□□□ 0.59
COL18A1-202ENST00000355480 RFX5P48382 616 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms