RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TNFRSF8P28908 595 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 YWHABP31946 246 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 ARPP19P56211 112 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 RABL6Q3YEC7 729 aaPredicted RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 SLC26A11Q86WA9 606 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 SLC44A5Q8NCS7 719 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 NSUN6Q8TEA1 469 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 CEP44Q9C0F1 390 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 MYLK2Q9H1R3 596 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 HMG20AQ9NP66 347 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 SLC39A10Q9ULF5 831 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 BCORL1Q5H9F3 1711 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 IL12RB1P42701 662 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 SWSAP1Q6NVH7 229 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATP8B4Q8TF62 1192 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 TNIP3Q96KP6 325 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 METTL5Q9NRN9 209 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 SUPT3HB4E1H0 165 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 PSMG1O95456 288 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 GSTA3Q16772 222 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 DIS3LQ8TF46 1054 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 TADA1Q96BN2 335 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 FANCEQ9HB96 536 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 BGNP21810 368 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 RAD23AP54725 363 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 PURAQ00577 322 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 NCOA4Q13772 614 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 TRPM1Q7Z4N2 1603 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 PNMA8CA0A1B0GUJ8 204 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 FCHO1O14526 889 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 IMPDH2P12268 514 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 RECQLP46063 649 aaPredicted RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 C12orf60Q5U649 245 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 ST13P5Q8NFI4 369 aaPredicted RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 TATDN2Q93075 761 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF669Q96BR6 464 aaPredicted RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 OXNAD1Q96HP4 312 aaPredicted RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 MAP3K14Q99558 947 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 C1orf50Q9BV19 199 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 TUBA8Q9NY65 449 aaPredicted RBP13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 ADAM30Q9UKF2 790 aa13.2□□□□□ -0.3
SYNCRIP-201ENST00000355238 STX7O15400 261 aaKnown RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 FASP25445 335 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 SOX11P35716 441 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ARHGAP17Q68EM7 881 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF560Q96MR9 790 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 TMEM237Q96Q45 408 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 GORASP1Q9BQQ3 440 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 CD209Q9NNX6 404 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 AFF4Q9UHB7 1163 aaKnown RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 KIF1BO60333 1816 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ABLIM1O14639 778 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 PON1P27169 355 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 DGUOKQ16854 277 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 KIZQ2M2Z5 673 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 KCTD21Q4G0X4 260 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 NAPEPLDQ6IQ20 393 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 SVOPQ8N4V2 548 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 NAT9Q9BTE0 207 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 PCDHA10Q9Y5I2 948 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 TIMM44O43615 452 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 LCP1P13796 627 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 RAG1P15918 1043 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 TTI2Q6NXR4 508 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 C19orf18Q8NEA5 215 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 MED15Q96RN5 788 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 GINS4Q9BRT9 223 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 DCUN1D5Q9BTE7 237 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ERBB3P21860 1342 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF862O60290 1169 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 HIST1H2AGP0C0S8 130 aaPredicted RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 HIST1H2ADP20671 130 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 CCNG2Q16589 344 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 AGAP9Q5VTM2 703 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 LMBRD2Q68DH5 695 aaPredicted RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 EEPD1Q7L9B9 569 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 VPS37AQ8NEZ2 397 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 HES6Q96HZ4 224 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 HIST1H2AHQ96KK5 128 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 HIST1H2AJQ99878 128 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 H2AFJQ9BTM1 129 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 NOL6Q9H6R4 1146 aaKnown RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 SNTNA6NMZ2 147 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 ZNF263O14978 683 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 CNOT3O75175 753 aaKnown RBP13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 NDUFS3O75489 264 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 MFN2O95140 757 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 FOXO4P98177 505 aa13.19□□□□□ -0.3
SYNCRIP-201ENST00000355238 SEPT1Q8WYJ6 367 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms