RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 CTAGE3PQ8IX95 158 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 OLIG1Q8TAK6 271 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 CCDC127Q96BQ5 260 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 HSD17B14Q9BPX1 270 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 BGNP21810 368 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 CPA2P48052 419 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 SCNN1DP51172 638 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 PPP3CAQ08209 521 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 TMEM63BQ5T3F8 832 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 RBM15BQ8NDT2 890 aaKnown RBP12.86□□□□□ -0.35
TRERF1-202ENST00000354325 PWWP2AQ96N64 755 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 FBXO6Q9NRD1 293 aaPredicted RBP12.86□□□□□ -0.35
TRERF1-202ENST00000354325 C6orf203Q9P0P8 240 aaPredicted RBP12.86□□□□□ -0.35
TRERF1-202ENST00000354325 VAV3Q9UKW4 847 aa12.86□□□□□ -0.35
TRERF1-202ENST00000354325 CD58P19256 250 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 AMPD1P23109 780 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 FOXB2Q5VYV0 432 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 MIER3Q7Z3K6 550 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 ARID3BQ8IVW6 561 aaPredicted RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 TMEM174Q8WUU8 243 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 IMPG2Q9BZV3 1241 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 NMUR2Q9GZQ4 415 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 R3HDM2Q9Y2K5 976 aaKnown RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 SH3GLB1Q9Y371 365 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 NFASCO94856 1347 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 HNRNPRO43390 633 aaKnown RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 POLR2MP0CAP2 368 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 NEK3P51956 506 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 STX3Q13277 289 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 FEZF2Q8TBJ5 459 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 SERPINB9P50453 376 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 ESRRGP62508 458 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 HPCAP84074 193 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 WASHC5Q12768 1159 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 GRAPQ13588 217 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
TRERF1-202ENST00000354325 NUF2Q9BZD4 464 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 WDR37Q9Y2I8 494 aa12.85□□□□□ -0.35
TRERF1-202ENST00000354325 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 GOLGA8RI6L899 631 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 PPP1R11O60927 126 aaPredicted RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 STAMBPO95630 424 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 DLDP09622 509 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 ALDH18A1P54886 795 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 NR1H2P55055 460 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 NOP14P78316 857 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 ITPK1Q13572 414 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 PIGHQ14442 188 aaPredicted RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 USH1GQ495M9 461 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 RNASEH2BQ5TBB1 312 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 ZFP1Q6P2D0 407 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 NRDE2Q9H7Z3 1164 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 RABGEF1Q9UJ41 708 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 MCF2LO15068 1137 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 BIRC5O15392 142 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 KRT7P08729 469 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 HARSP12081 509 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 SULT2A1Q06520 285 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 SEPT6Q14141 434 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 TFDP1Q14186 410 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 TFDP3Q5H9I0 405 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 HP1BP3Q5SSJ5 553 aaPredicted RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 ARCQ7LC44 396 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 EBF3Q9H4W6 596 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 ALG13Q9NP73 1137 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 CLIC5Q9NZA1 410 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 RAB26Q9ULW5 256 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 ZNF536O15090 1300 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 SLITRK3O94933 977 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 SNRNP35Q16560 246 aaKnown RBP12.84□□□□□ -0.35
TRERF1-202ENST00000354325 DNAJC24Q6P3W2 148 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 FBXO36Q8NEA4 188 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 C11orf70Q9BRQ4 267 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 CD209Q9NNX6 404 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 EFR3BQ9Y2G0 817 aa12.84□□□□□ -0.35
TRERF1-202ENST00000354325 MEIS2O14770 477 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 CASQ2O14958 399 aaPredicted RBP12.83□□□□□ -0.36
TRERF1-202ENST00000354325 SERPINB2P05120 415 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 TMEM126BQ8IUX1 230 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 LBHD1Q9BQE6 289 aaPredicted RBP12.83□□□□□ -0.36
TRERF1-202ENST00000354325 ARMCX1Q9P291 453 aa12.83□□□□□ -0.36
TRERF1-202ENST00000354325 SLC7A8Q9UHI5 535 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms