RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 PARD3BQ8TEW8 1205 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 UCN3Q969E3 161 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 EIF2AK1Q9BQI3 630 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 IDI2Q9BXS1 227 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NKX2-4Q9H2Z4 354 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 IFT22Q9H7X7 185 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 HHATLQ9HCP6 504 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 MRS2Q9HD23 443 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NGBQ9NPG2 151 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 PRDM8Q9NQV8 689 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 LRP2BPQ9P2M1 347 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 TJP2Q9UDY2 1190 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 SUN2Q9UH99 717 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NAGPAQ9UK23 515 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 CBLCQ9ULV8 474 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADAMTS8Q9UP79 889 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NT5C1B-RDH14C9J2C7 533 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NEDD8-MDP1E9PL57 170 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZNF213O14771 459 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 DNTTP04053 509 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 OAS2P29728 719 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 POLR2BP30876 1174 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 LSP1P33241 339 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 SSR1P43307 286 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 PMS1P54277 932 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ACTG1P63261 375 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 UBE3AQ05086 875 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 SSRP1Q08945 709 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 LMOD3Q0VAK6 560 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 IKBKEQ14164 716 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NUGGCQ68CJ6 796 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 DCLRE1AQ6PJP8 1040 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 RRAGAQ7L523 313 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 LRRTM4Q86VH4 590 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADCY4Q8NFM4 1077 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NEK9Q8TD19 979 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 CLEC4DQ8WXI8 215 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 MAP3K14Q99558 947 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 BRF2Q9HAW0 419 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 OXSMQ9NWU1 459 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 WDR35Q9P2L0 1181 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 SERGEFQ9UGK8 458 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ASAP2O43150 1006 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 IPO13O94829 963 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 UBXN7O94888 489 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 FYNP06241 537 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 PF4V1P10720 104 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ITGA6P23229 1130 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 IGFALSP35858 605 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADCY7P51828 1080 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 DMTNQ08495 405 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 PNOCQ13519 176 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 PWP1Q13610 501 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 TYSND1Q2T9J0 566 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 PLA2G4EQ3MJ16 856 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 FAM47CQ5HY64 1035 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 USHBP1Q8N6Y0 703 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZFPM2Q8WW38 1151 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 CRAMP1Q96RY5 1269 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 YME1L1Q96TA2 773 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 LIN7BQ9HAP6 207 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 GPAMQ9HCL2 828 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 DCP1AQ9NPI6 582 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 PAK6Q9NQU5 681 aaPredicted RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 MAN1C1Q9NR34 630 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC22A11Q9NSA0 550 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 MAFFQ9ULX9 164 aa2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 NDRG2Q9UN36 371 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 EIF3LQ9Y262 564 aaKnown RBP2.37□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRBV23-1A0A0A0MS06 115 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 A0A0A6YYK5 440 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 IGF2BP3O00425 579 aaKnown RBP eCLIP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 PSMD14O00487 310 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 E2F3O00716 465 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 HTRA2O43464 458 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 RNGTTO60942 597 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 ERAL1O75616 437 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 HTR3BO95264 441 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 CPP00450 1065 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 CCL5P13501 91 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 SDHAP31040 664 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 TNNT2P45379 298 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 VPS41P49754 854 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 PDE1AP54750 535 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZNF200P98182 395 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 TEFQ10587 303 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 ASPHQ12797 758 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 UAP1L1Q3KQV9 507 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 EOGTQ5NDL2 527 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 TSTD2Q5T7W7 516 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 PPP1R26Q5T8A7 1209 aaPredicted RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 TTC22Q5TAA0 569 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRMT1LQ7Z2T5 733 aaKnown RBP2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 CATIPQ7Z7H3 387 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 ANKRD42Q8N9B4 389 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 ZNF540Q8NDQ6 660 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 GMCL1P1Q8NEA9 526 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 OR7D4Q8NG98 312 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 SLC5A11Q8WWX8 675 aa2.36□□□□□ -2.03
SMARCAD1-201ENST00000354268 SPSB2Q99619 263 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms