RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 C11orf74Q86VG3 221 aa11.1□□□□□ -0.63
PKP1-202ENST00000352845 ALKBH8Q96BT7 664 aaKnown RBP11.1□□□□□ -0.63
PKP1-202ENST00000352845 CLIP3Q96DZ5 547 aa11.1□□□□□ -0.63
PKP1-202ENST00000352845 TSSK1BQ9BXA7 367 aa11.1□□□□□ -0.63
PKP1-202ENST00000352845 MANSC1Q9H8J5 431 aa11.1□□□□□ -0.63
PKP1-202ENST00000352845 KIAA1586Q9HCI6 787 aa11.1□□□□□ -0.63
PKP1-202ENST00000352845 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
PKP1-202ENST00000352845 C6orf203Q9P0P8 240 aaPredicted RBP11.1□□□□□ -0.63
PKP1-202ENST00000352845 GNPTGQ9UJJ9 305 aa11.1□□□□□ -0.63
PKP1-202ENST00000352845 PFDN6O15212 129 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 CCNT2O60583 730 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 PABPC1P11940 636 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 ATP6V1B1P15313 513 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 PCYT1AP49585 367 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 ITGA8P53708 1063 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 CDK18Q07002 472 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 NSUN2Q08J23 767 aaKnown RBP eCLIP11.09□□□□□ -0.63
PKP1-202ENST00000352845 KCTD21Q4G0X4 260 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 FAAH2Q6GMR7 532 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 ELMSAN1Q6PJG2 1045 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 NOP9Q86U38 636 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 CENPSQ8N2Z9 138 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 TTC39CQ8N584 583 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 OLIG1Q8TAK6 271 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SH3RF3Q8TEJ3 882 aaPredicted RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 USP6NLQ92738 828 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 CELF1Q92879 486 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 NUF2Q9BZD4 464 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 KCTD10Q9H3F6 313 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 KCNK13Q9HB14 408 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 FBXO6Q9NRD1 293 aaPredicted RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 VPS45Q9NRW7 570 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 DNAJC17Q9NVM6 304 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 TMOD2Q9NZR1 351 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SLC24A2Q9UI40 661 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 ADAMTS6Q9UKP5 1117 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 DOLKQ9UPQ8 538 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 NOX1Q9Y5S8 564 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SNED1Q8TER0 1413 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 GOLGB1Q14789 3259 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 TNFRSF10AO00220 468 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 DNAJA2O60884 412 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 FUCA1P04066 466 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 DLDP09622 509 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SRGAP2BP0DMP2 458 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 PON1P27169 355 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 GSSP48637 474 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 C21orf59P57076 290 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SF3B3Q15393 1217 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 SIX1Q15475 284 aaPredicted RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 LRRC36Q1X8D7 754 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 GRAMD1BQ3KR37 738 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 FAM26FQ5R3K3 315 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 DCLRE1AQ6PJP8 1040 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 RNF207Q6ZRF8 634 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 WDR75Q8IWA0 830 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 CCDC89Q8N998 374 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 CCDC138Q96M89 665 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 PIGSQ96S52 555 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 CTRCQ99895 268 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 VTA1Q9NP79 307 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SLC38A7Q9NVC3 462 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 TRNAU1APQ9NX07 287 aaKnown RBP11.09□□□□□ -0.63
PKP1-202ENST00000352845 KCNK4Q9NYG8 393 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 SORCS3Q9UPU3 1222 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 PRELID1Q9Y255 219 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 MAD1L1Q9Y6D9 718 aa11.09□□□□□ -0.63
PKP1-202ENST00000352845 GSTTP1A0A1W2PQM5 241 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 ESYT2A0FGR8 921 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 DGKIO75912 1065 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 TSPY3P0CV98 308 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 TSPY8P0CW00 308 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 CHRNB2P17787 502 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 ENDOUP21128 410 aaKnown RBP11.08□□□□□ -0.64
PKP1-202ENST00000352845 IVDP26440 423 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 PRDX6P30041 224 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 PIK3CAP42336 1068 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 ALDH3B2P48448 385 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 CYTH1Q15438 398 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 ZNF394Q53GI3 561 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 HERC4Q5GLZ8 1057 aaPredicted RBP11.08□□□□□ -0.64
PKP1-202ENST00000352845 C6orf183Q5T699 404 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 SPOPLQ6IQ16 392 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 TPTE2Q6XPS3 522 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 ANKS1BQ7Z6G8 1248 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 CHSY1Q86X52 802 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 ZDHHC14Q8IZN3 488 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 REXO1Q8N1G1 1221 aaKnown RBP11.08□□□□□ -0.64
PKP1-202ENST00000352845 LNX1Q8TBB1 728 aaPredicted RBP11.08□□□□□ -0.64
PKP1-202ENST00000352845 PLEKHA8Q96JA3 519 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 NLRP4Q96MN2 994 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
PKP1-202ENST00000352845 AJAP1Q9UKB5 411 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms