RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KITP10721 976 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 MAN1A1P33908 653 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 KCNA1Q09470 495 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 CYTH1Q15438 398 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 OGFRL1Q5TC84 451 aaPredicted RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 SNRNP48Q6IEG0 339 aaKnown RBP13.86□□□□□ -0.19
IFT88-202ENST00000351808 C16orf87Q6PH81 154 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 CENPSQ8N2Z9 138 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 BANPQ8N9N5 519 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 BBOF1Q8ND07 529 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 MORC4Q8TE76 937 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 STARD8Q92502 1023 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 ITPKCQ96DU7 683 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 FAM111AQ96PZ2 611 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 BCS1LQ9Y276 419 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 TIMM22Q9Y584 194 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 NUB1Q9Y5A7 615 aa13.86□□□□□ -0.19
IFT88-202ENST00000351808 TM9SF1O15321 606 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 MARCH6O60337 910 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CDH3P22223 829 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 PPARGP37231 505 aaPredicted RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 IRX4P78413 519 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 TCHHL1Q5QJ38 904 aaPredicted RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 C6orf52Q5T4I8 152 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 DZIP1Q86YF9 867 aaKnown RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 ARID3BQ8IVW6 561 aaPredicted RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 GALNT4Q8N4A0 578 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 TRIML2Q8N7C3 387 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 TTC13Q8NBP0 860 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CCDC106Q9BWC9 280 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 BCAS3Q9H6U6 928 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 MARCOQ9UEW3 520 aaPredicted RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 NOX1Q9Y5S8 564 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 UBR1Q8IWV7 1749 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 POTEB3A0JP26 581 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 H3BNX3 289 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 PHBP35232 272 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 OASLQ15646 514 aaKnown RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 CBWD6Q4V339 395 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CBWD3Q5JTY5 395 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CBWD5Q5RIA9 395 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 POTEBQ6S5H4 581 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 GSTA5Q7RTV2 222 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 ANKMY2Q8IV38 441 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 GSDMBQ8TAX9 411 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 PCDHB18PQ96TA0 734 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 DCUN1D5Q9BTE7 237 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 PLVAPQ9BX97 442 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 ZNF395Q9H8N7 513 aaPredicted RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 CYP4F11Q9HBI6 524 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 ZNF287Q9HBT7 754 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 SSU72Q9NP77 194 aaKnown RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 ATAD3AQ9NVI7 634 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 SLC24A2Q9UI40 661 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
IFT88-202ENST00000351808 MROH5Q6ZUA9 1318 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 PDXKO00764 312 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CYP2C9P11712 490 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 FMO5P49326 533 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 ARPC4P59998 168 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 DMPKQ09013 629 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CPNE9Q8IYJ1 553 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CCDC127Q96BQ5 260 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 RILPQ96NA2 401 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 C1orf21Q9H246 121 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 KCNK4Q9NYG8 393 aa13.85□□□□□ -0.19
IFT88-202ENST00000351808 CAMTA1Q9Y6Y1 1673 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 USP17L3A6NCW0 530 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 USP17L4A6NCW7 530 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 GOLGA8TH3BQL2 631 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 CCNT2O60583 730 aaKnown RBP13.84□□□□□ -0.19
IFT88-202ENST00000351808 LPXNO60711 386 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 ZBTB11O95625 1053 aaPredicted RBP13.84□□□□□ -0.19
IFT88-202ENST00000351808 NUP107P57740 925 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 USP17L1Q7RTZ2 530 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 GLIS1Q8NBF1 620 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 CGREF1Q99674 301 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 HPS6Q86YV9 775 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 ACTRT2Q8TDY3 377 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 ZNF512Q96ME7 567 aaPredicted RBP13.84□□□□□ -0.19
IFT88-202ENST00000351808 SHCBP1LQ9BZQ2 653 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 INTS2Q9H0H0 1204 aaKnown RBP13.84□□□□□ -0.19
IFT88-202ENST00000351808 APEX2Q9UBZ4 518 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 RAB26Q9ULW5 256 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 GNEQ9Y223 722 aaKnown RBP13.84□□□□□ -0.19
IFT88-202ENST00000351808 POMPQ9Y244 141 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 ASTN1O14525 1302 aa13.84□□□□□ -0.19
IFT88-202ENST00000351808 C10orf71Q711Q0 1435 aa13.83□□□□□ -0.2
IFT88-202ENST00000351808 TRIM49P0CI25 452 aa13.83□□□□□ -0.2
IFT88-202ENST00000351808 TRIM49CP0CI26 452 aa13.83□□□□□ -0.2
IFT88-202ENST00000351808 AQP5P55064 265 aa13.83□□□□□ -0.2
IFT88-202ENST00000351808 TCEAL1Q15170 157 aa13.83□□□□□ -0.2
IFT88-202ENST00000351808 USP41Q3LFD5 358 aa13.83□□□□□ -0.2
IFT88-202ENST00000351808 NANOGP8Q6NSW7 305 aa13.83□□□□□ -0.2
IFT88-202ENST00000351808 DDHD1Q8NEL9 900 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms