RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 TRNAU1APQ9NX07 287 aaKnown RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 CORO1CQ9ULV4 474 aaPredicted RBP6.27□□□□□ -1.41
RFC1-201ENST00000349703 DNAJC25-GNG10A0A024R161 153 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ADCY3O60266 1144 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 HBP1O60381 514 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 TAF5LO75529 589 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ATP5JP18859 108 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ATP5DP30049 168 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 IL15P40933 162 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 PPP1R2P41236 205 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ATP11AP98196 1134 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 DOK6Q6PKX4 331 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 CD300LDQ6UXZ3 194 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 NLGN4XQ8N0W4 816 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 GIMAP8Q8ND71 665 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 KAT5Q92993 513 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 USP13Q92995 863 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 MRPL4Q9BYD3 311 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 PLEKHA4Q9H4M7 779 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 AAASQ9NRG9 546 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 CHST7Q9NS84 486 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 KLC4Q9NSK0 619 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 RNF181Q9P0P0 153 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 L1RE1Q9UN81 338 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 HEMK1Q9Y5R4 338 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 VWDEQ8N2E2 1590 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 NEXMIFQ5QGS0 1516 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 UPK3BL1B0FP48 263 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 UPK3BL2E5RIL1 263 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 CLUP10909 449 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 TCP1P17987 556 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 GPC1P35052 558 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 CA8P35219 290 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 OLFML2BQ68BL8 750 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 TRIM72Q6ZMU5 477 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 RD3Q7Z3Z2 195 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 KRT73Q86Y46 540 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 C4orf19Q8IY42 314 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 MB21D1Q8N884 522 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 UTP4Q969X6 686 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 SLC7A6OSQ96CW6 309 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 CCDC42Q96M95 316 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 EDEM3Q9BZQ6 932 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 IPPKQ9H8X2 491 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 MRPL22Q9NWU5 206 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 J3KRW8 73 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 RNF113AO15541 343 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 F12P00748 615 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 UGT2B4P06133 528 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 CALB2P22676 271 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 GGT5P36269 586 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 VSNL1P62760 191 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 SLC13A2Q13183 592 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 PRKG2Q13237 762 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 IDI1Q13907 227 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 LDLRAP1Q5SW96 308 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 GKAP1Q5VSY0 366 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 XRRA1Q6P2D8 792 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ENGASEQ8NFI3 743 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ZNF516Q92618 1163 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 MTIF3Q9H2K0 278 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 MROH8Q9H579 483 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 COPS7BQ9H9Q2 264 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 CNTN3Q9P232 1028 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 FAM198AQ9UFP1 575 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 NAGPAQ9UK23 515 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 COLQQ9Y215 455 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 CLIC4Q9Y696 253 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 USP31Q70CQ4 1352 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 PIPSLA2A3N6 862 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 SGK1O00141 431 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 MFAP3LO75121 409 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ATP4AP20648 1035 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 EEF1B2P24534 225 aaKnown RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 GRIK1P39086 918 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ALDH5A1P51649 535 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 ADCY2Q08462 1091 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ZNF423Q2M1K9 1284 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 TMEM201Q5SNT2 666 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 PHF19Q5T6S3 580 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 TRIM65Q6PJ69 517 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 LRP10Q7Z4F1 713 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 METTL23Q86XA0 190 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 THEMISQ8N1K5 641 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 VPS33AQ96AX1 596 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ZBTB10Q96DT7 871 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 ABHD17AQ96GS6 310 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 RAX2Q96IS3 184 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 VRK1Q99986 396 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 CYP26B1Q9NR63 512 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 C6orf203Q9P0P8 240 aaPredicted RBP6.26□□□□□ -1.41
RFC1-201ENST00000349703 HPCAL4Q9UM19 191 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 HYOU1Q9Y4L1 999 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 PCDHGA8Q9Y5G5 932 aa6.26□□□□□ -1.41
RFC1-201ENST00000349703 hCG_1809904A0A1W2PP81 198 aa6.25□□□□□ -1.41
RFC1-201ENST00000349703 A0A1W2PPE2 198 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms