RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PLXNA4Q9HCM2 1894 aa28.7■■■□□ 2.18
SSBP4-202ENST00000348495 TAP1Q03518 808 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 MAPRE1Q15691 268 aaKnown RBP28.69■■■□□ 2.18
SSBP4-202ENST00000348495 CCDC122Q5T0U0 273 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 KIAA1841Q6NSI8 718 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 TTC30AQ86WT1 665 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 ZNF518BQ9C0D4 1074 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 ISCUQ9H1K1 167 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 IPO7O95373 1038 aaKnown RBP28.69■■■□□ 2.18
SSBP4-202ENST00000348495 RB1P06400 928 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 KRT83P78385 493 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 CENPCQ03188 943 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 PSMD5Q16401 504 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 ANKRD52Q8NB46 1076 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 ZBP1Q9H171 429 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 PCDHA13Q9Y5I0 950 aa28.69■■■□□ 2.18
SSBP4-202ENST00000348495 M0QYV0 167 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 OR4Q2P0C623 313 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 ADORA2BP29275 332 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 GPD2P43304 727 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 ERVK-21P61565 698 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 C10orf76Q5T2E6 689 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 NAA35Q5VZE5 725 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 SLC8B1Q6J4K2 584 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 DCP1BQ8IZD4 617 aaKnown RBP28.68■■■□□ 2.18
SSBP4-202ENST00000348495 TMEM35BQ8NCS4 154 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 KIAA1524Q8TCG1 905 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 MYLPFQ96A32 169 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 SAMD11Q96NU1 681 aa28.68■■■□□ 2.18
SSBP4-202ENST00000348495 CLDN5O00501 218 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 LILRB3O75022 631 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 CCDC175P0C221 793 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 RAB30Q15771 203 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 ACAD10Q6JQN1 1059 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 UBA3Q8TBC4 463 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 TGS1Q96RS0 853 aaKnown RBP28.67■■■□□ 2.18
SSBP4-202ENST00000348495 HESX1Q9UBX0 185 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 CYTH4Q9UIA0 394 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 PPP2R2CQ9Y2T4 447 aa28.67■■■□□ 2.18
SSBP4-202ENST00000348495 RTN2O75298 545 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 URODP06132 367 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 CTSAP10619 480 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 C1orf131Q8NDD1 294 aaKnown RBP28.66■■■□□ 2.18
SSBP4-202ENST00000348495 SPPL3Q8TCT6 385 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 CPA5Q8WXQ8 436 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 CEP83Q9Y592 693 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 TMCO5BA8MYB1 307 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 MAGEA1P43355 309 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 GPR17Q13304 367 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 SLC39A12Q504Y0 691 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 FAM35AQ86V20 835 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 DNAAF5Q86Y56 855 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 FBXO22Q8NEZ5 403 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 SLC35F5Q8WV83 523 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 SECISBP2LQ93073 1101 aaKnown RBP28.66■■■□□ 2.18
SSBP4-202ENST00000348495 CLSTN3Q9BQT9 956 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 DUSP16Q9BY84 665 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 ALG13Q9NP73 1137 aaKnown RBP28.66■■■□□ 2.18
SSBP4-202ENST00000348495 MSRAQ9UJ68 235 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 CDY1Q9Y6F8 540 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 ATP8B3O60423 1300 aa28.66■■■□□ 2.18
SSBP4-202ENST00000348495 C2CD2LO14523 706 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 ADAM12O43184 909 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 FTLP02792 175 aaPredicted RBP28.65■■■□□ 2.18
SSBP4-202ENST00000348495 PTPRDP23468 1912 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 BCAT1P54687 386 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 UBE3AQ05086 875 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 NFE2Q16621 373 aaPredicted RBP28.65■■■□□ 2.18
SSBP4-202ENST00000348495 PHF13Q86YI8 300 aaPredicted RBP28.65■■■□□ 2.18
SSBP4-202ENST00000348495 C11orf84Q9BUA3 381 aaPredicted RBP28.65■■■□□ 2.18
SSBP4-202ENST00000348495 PACSIN1Q9BY11 444 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 MRPL17Q9NRX2 175 aaKnown RBP28.65■■■□□ 2.18
SSBP4-202ENST00000348495 KCND1Q9NSA2 647 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 MTUS1Q9ULD2 1270 aa28.65■■■□□ 2.18
SSBP4-202ENST00000348495 CHD9Q3L8U1 2897 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 SETSIPP0DME0 302 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 VAV2P52735 878 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 BST2Q10589 180 aaKnown RBP28.64■■■□□ 2.18
SSBP4-202ENST00000348495 PTPN14Q15678 1187 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 PPP1R2P3Q6NXS1 205 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 C4orf50Q6ZRC1 276 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 MED10Q9BTT4 135 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 NKX2-4Q9H2Z4 354 aa28.64■■■□□ 2.18
SSBP4-202ENST00000348495 NPR3P17342 541 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 RPL17P18621 184 aaKnown RBP28.63■■■□□ 2.17
SSBP4-202ENST00000348495 MMP8P22894 467 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 NSFP46459 744 aaKnown RBP28.63■■■□□ 2.17
SSBP4-202ENST00000348495 CDR1P51861 262 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 PDE4CQ08493 712 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 CFAP221Q4G0U5 840 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 CHRDL2Q6WN34 429 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 MON1BQ7L1V2 547 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 SMARCD1Q96GM5 515 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 RXFP1Q9HBX9 757 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 LUC7LQ9NQ29 371 aaKnown RBP28.63■■■□□ 2.17
SSBP4-202ENST00000348495 KRT82Q9NSB4 513 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 INTUQ9ULD6 942 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 A0A0U1RQJ8 604 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 FAM170AA1A519 330 aa28.63■■■□□ 2.17
SSBP4-202ENST00000348495 RCCD1A6NED2 376 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms