RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 EPN1Q9Y6I3 576 aaPredicted RBP20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 MYH10P35580 1976 aa20.17■□□□□ 0.82
CHMP4A-201ENST00000347519 OR6C75A6NL08 312 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 AKR1B10O60218 316 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 CSPG5O95196 566 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 VNN2O95498 520 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 RB1P06400 928 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 CTSAP10619 480 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 ARPP19P56211 112 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 TSPY1Q01534 308 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 CYP27A1Q02318 531 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 CAMK1Q14012 370 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 SLC39A12Q504Y0 691 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 ACRBPQ8NEB7 543 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 FBXO22Q8NEZ5 403 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 HNRNPABQ99729 332 aaKnown RBP20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 DESI2Q9BSY9 194 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 ZNF518BQ9C0D4 1074 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 DEF6Q9H4E7 631 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 TMEM30AQ9NV96 361 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 CYTH4Q9UIA0 394 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 BACE2Q9Y5Z0 518 aa20.16■□□□□ 0.82
CHMP4A-201ENST00000347519 EPOPA6NHQ4 379 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 TMCO5BA8MYB1 307 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 TULP2O00295 520 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 ARHGAP6O43182 974 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 MED7O43513 233 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 NDUFA10O95299 355 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 CYP1A1P04798 512 aaPredicted RBP20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 URODP06132 367 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 CACNA2D1P54289 1103 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 BMS1Q14692 1282 aaKnown RBP20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 PTPN14Q15678 1187 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 SLC18A3Q16572 532 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 CLEC16AQ2KHT3 1053 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 PKDCCQ504Y2 493 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 PPP2R2DQ66LE6 453 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 CCDC170Q8IYT3 715 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 SAMD11Q96NU1 681 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 LZTS1Q9Y250 596 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 CDY1Q9Y6F8 540 aa20.15■□□□□ 0.82
CHMP4A-201ENST00000347519 M0QYV0 167 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 LCA5LO95447 670 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 UNGP13051 313 aaPredicted RBP20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 OR1D2P34982 312 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 IRS1P35568 1242 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 CYLC1P35663 651 aaPredicted RBP20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 NOMO3P69849 1222 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 GPM6BQ13491 265 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 NAA35Q5VZE5 725 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 RNF19BQ6ZMZ0 732 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 FAM35AQ86V20 835 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 C1orf131Q8NDD1 294 aaKnown RBP20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 CPA5Q8WXQ8 436 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 PGLYRP2Q96PD5 576 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 MED10Q9BTT4 135 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 PDCL3Q9H2J4 239 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 CHD7Q9P2D1 2997 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 NAGPAQ9UK23 515 aa20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 COL4A4P53420 1690 aaPredicted RBP20.14■□□□□ 0.81
CHMP4A-201ENST00000347519 PLXNA3P51805 1871 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 A0A0U1RQJ8 604 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 WDR27A2RRH5 827 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 EIF3CLB5ME19 914 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 BEST1O76090 585 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 CXCL14O95715 111 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 ANXA13P27216 316 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 CDH5P33151 784 aaPredicted RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 GPD2P43304 727 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 SMAD3P84022 425 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 ROR1Q01973 937 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 SLC8B1Q6J4K2 584 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 TMC7Q7Z402 723 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 DCP1BQ8IZD4 617 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 ATRIPQ8WXE1 791 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 ARNTL2Q8WYA1 636 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 SECISBP2LQ93073 1101 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 TIFAQ96CG3 184 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 EIF3CQ99613 913 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 TCF25Q9BQ70 676 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 C11orf84Q9BUA3 381 aaPredicted RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 CRISPLD1Q9H336 500 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 RXFP1Q9HBX9 757 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 MRPL17Q9NRX2 175 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 TFR2Q9UP52 801 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 LAMA3Q16787 3333 aa20.13■□□□□ 0.81
CHMP4A-201ENST00000347519 HIDE1A8MVS5 230 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 H3BNC9 293 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 FSCN2O14926 492 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 CPB1P15086 417 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 BDNFP23560 247 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 PDE4CQ08493 712 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 GPR17Q13304 367 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 STILQ15468 1287 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 CCDC122Q5T0U0 273 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 PLPP4Q5VZY2 271 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 ALKBH5Q6P6C2 394 aaKnown RBP20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 VPS36Q86VN1 386 aa20.12■□□□□ 0.81
CHMP4A-201ENST00000347519 TTC9BQ8N6N2 239 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms