RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 DCAF17Q5H9S7 520 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 MDH1BQ5I0G3 518 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 WDR44Q5JSH3 913 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 FAM78AQ5JUQ0 283 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 GPR158Q5T848 1215 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 ANKRD40Q6AI12 368 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 KLHL10Q6JEL2 608 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 TMC8Q8IU68 726 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 TRIML1Q8N9V2 468 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 GPR152Q8TDT2 470 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 DEPDC1BQ8WUY9 529 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 MYLPFQ96A32 169 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 ASB16Q96NS5 453 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 GBP4Q96PP9 640 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 TRMT61BQ9BVS5 477 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 ELOVL4Q9GZR5 314 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 TASP1Q9H6P5 420 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 BRD9Q9H8M2 597 aa16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 ARMCX3Q9UH62 379 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-201ENST00000346501 BIN1O00499 593 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 ATP2C2O75185 946 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 VNN1O95497 513 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 ASS1P00966 412 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 DDX6P26196 483 aaKnown RBP eCLIP16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 CLCN5P51795 746 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 NUBP1P53384 320 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 GPC5P78333 572 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 CETN1Q12798 172 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 CCDC40Q4G0X9 1142 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 TTC39CQ8N584 583 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 B3GALNT2Q8NCR0 500 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 ST13P5Q8NFI4 369 aaPredicted RBP16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 IRF7Q92985 503 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 CEP63Q96MT8 703 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 PKMYT1Q99640 499 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 MED10Q9BTT4 135 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 LRRC3Q9BY71 257 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 ARHGEF3Q9NR81 526 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 CA14Q9ULX7 337 aa16.81■□□□□ 0.28
TSPAN4-201ENST00000346501 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 PSMC3P17980 439 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 BDNFP23560 247 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 AVPR2P30518 371 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 AVPR1AP37288 418 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 NOP14P78316 857 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 ASTLQ6HA08 431 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 TANGO2Q6ICL3 276 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 GAREM2Q75VX8 874 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 UNC93AQ86WB7 457 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 FBXL13Q8NEE6 735 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 NELFBQ8WX92 580 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 PCED1BQ96HM7 432 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 RPP25Q9BUL9 199 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 IRF2BPLQ9H1B7 796 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 SMYD3Q9H7B4 428 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 CYP3A43Q9HB55 503 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 TRPV4Q9HBA0 871 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 ZNF334Q9HCZ1 680 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 CRTAC1Q9NQ79 661 aa16.8■□□□□ 0.28
TSPAN4-201ENST00000346501 SLC38A8A6NNN8 435 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 ZNF263O14978 683 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 HCRTO43612 131 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 MOSPD3O75425 235 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 GNA14O95837 355 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 PDE6CP51160 858 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 CDH8P55286 799 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 PRKCQQ04759 706 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 PPP3CAQ08209 521 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 PAK1Q13153 545 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 MORC3Q14149 939 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 CAMK4Q16566 473 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 FOXR2Q6PJQ5 311 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 ARID3BQ8IVW6 561 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 TAS1R2Q8TE23 839 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 DNASE1L2Q92874 299 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 TRMT2BQ96GJ1 504 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 FAXDC2Q96IV6 333 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 SPATA17Q96L03 361 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 NIF3L1Q9GZT8 377 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 THG1LQ9NWX6 298 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 KIAA1468Q9P260 1216 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 MRPS17Q9Y2R5 130 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 NOTCH4Q99466 2003 aa16.79■□□□□ 0.28
TSPAN4-201ENST00000346501 TRIM49BA6NDI0 452 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 HEPACAM2A8MVW5 462 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 NOL4O94818 638 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 PDGFBP01127 241 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 GPR15P49685 360 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 NLRP12P59046 1061 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 CYP4F8P98187 520 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 SLC44A4Q53GD3 710 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 SDHAF4Q5VUM1 108 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 DENND5BQ6ZUT9 1274 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 FRMD5Q7Z6J6 570 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
TSPAN4-201ENST00000346501 CSGALNACT1Q8TDX6 532 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms