RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CTHP32929 405 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 ATXN1P54253 815 aaKnown RBP13.32□□□□□ -0.28
SGCA-202ENST00000344627 CYP4F8P98187 520 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 SIM2Q14190 667 aaPredicted RBP13.32□□□□□ -0.28
SGCA-202ENST00000344627 CSRP2Q16527 193 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 ITPRIPL2Q3MIP1 535 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 RESP18Q5W5W9 173 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 SCARA3Q6AZY7 606 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 TSSK4Q6SA08 328 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 ADGRF2Q8IZF7 708 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 TMEM86AQ8N2M4 240 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 OR5B17Q8NGF7 314 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 ZNF507Q8TCN5 953 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 HPDLQ96IR7 371 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 MKNK1Q9BUB5 465 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 ABCB6Q9NP58 842 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 SIX4Q9UIU6 781 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 DNAH14Q0VDD8 3507 aa13.32□□□□□ -0.28
SGCA-202ENST00000344627 MED19A0JLT2 244 aaPredicted RBP13.31□□□□□ -0.28
SGCA-202ENST00000344627 ATF6P18850 670 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 TGM1P22735 817 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 HOXD13P35453 343 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 AVPR1AP37288 418 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 LHX1P48742 406 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 GPR15P49685 360 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 PDE6CP51160 858 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 RPL10AP62906 217 aaKnown RBP13.31□□□□□ -0.28
SGCA-202ENST00000344627 GRSF1Q12849 480 aaKnown RBP eCLIP13.31□□□□□ -0.28
SGCA-202ENST00000344627 CUL4BQ13620 913 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 CCINQ13939 588 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
SGCA-202ENST00000344627 FBXO43Q4G163 708 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 SDHAF4Q5VUM1 108 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 CNNM4Q6P4Q7 775 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 WDR5BQ86VZ2 330 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
SGCA-202ENST00000344627 CAMKK1Q8N5S9 505 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 KIAA1958Q8N8K9 716 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 STKLD1Q8NE28 680 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 TTC8Q8TAM2 541 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 CCDC127Q96BQ5 260 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 MMS19Q96T76 1030 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 ACBD6Q9BR61 282 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 AGPAT3Q9NRZ7 376 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 SERTAD1Q9UHV2 236 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
SGCA-202ENST00000344627 SLC30A4O14863 429 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 PFKLP17858 780 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 CYP2F1P24903 491 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 PCSK1P29120 753 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 SATB1Q01826 763 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 PDGFRLQ15198 375 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 SNRNP35Q16560 246 aaKnown RBP13.3□□□□□ -0.28
SGCA-202ENST00000344627 DDR2Q16832 855 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
SGCA-202ENST00000344627 EPM2AIP1Q7L775 607 aaPredicted RBP13.3□□□□□ -0.28
SGCA-202ENST00000344627 DPH6Q7L8W6 267 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 OSTM1Q86WC4 334 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 WDR49Q8IV35 697 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 SCN4BQ8IWT1 228 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 CMTM8Q8IZV2 173 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 TOP6BLQ8N6T0 577 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 XXYLT1Q8NBI6 393 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 TTC16Q8NEE8 873 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 SCFD1Q8WVM8 642 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 MRPS31Q92665 395 aaKnown RBP13.3□□□□□ -0.28
SGCA-202ENST00000344627 RSPRY1Q96DX4 576 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 ZFYVE19Q96K21 471 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 EXOC1Q9NV70 894 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 GDAP2Q9NXN4 497 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 RCOR1Q9UKL0 485 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 NCANO14594 1321 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 UBE4BO95155 1302 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
SGCA-202ENST00000344627 NUP210Q8TEM1 1887 aaPredicted RBP13.29□□□□□ -0.28
SGCA-202ENST00000344627 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 PVALEFA0A1B0GWK0 134 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 SLC38A8A6NNN8 435 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 CHURC1-FNTBB4DL54 471 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 K7ESF4 209 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 TGFB1I1O43294 461 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 HCRTO43612 131 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 EXOC3O60645 756 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 PHACTR2O75167 634 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 PDGFRBP09619 1106 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 DRD1P21728 446 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 LIMK1P53667 647 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 CYP24A1Q07973 514 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 TRPC3Q13507 836 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 RUNX3Q13761 415 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 SOWAHAQ2M3V2 549 aa13.29□□□□□ -0.28
SGCA-202ENST00000344627 CC2D1AQ6P1N0 951 aaPredicted RBP13.29□□□□□ -0.28
SGCA-202ENST00000344627 PRR23BQ6ZRT6 265 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms