RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 CASKIN2Q8WXE0 1202 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 SIGLEC16A6NMB1 481 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 ARVCFO00192 962 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 CYB561D2O14569 222 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
CDC42-202ENST00000344548 GRAP2O75791 330 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 RARAP10276 462 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 KRT3P12035 628 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 ADORA2BP29275 332 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 SLC1A1P43005 524 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 SSR1P43307 286 aaKnown RBP14.34□□□□□ -0.11
CDC42-202ENST00000344548 GABRB2P47870 512 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 SLC13A5Q86YT5 568 aaPredicted RBP14.34□□□□□ -0.11
CDC42-202ENST00000344548 ADGRF2Q8IZF7 708 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 SLC35F5Q8WV83 523 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 ZNF560Q96MR9 790 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 DEFB118Q96PH6 123 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 TRAIPQ9BWF2 469 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 INPP5FQ9Y2H2 1132 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 GIT1Q9Y2X7 761 aa14.34□□□□□ -0.11
CDC42-202ENST00000344548 PI4K2BG5E9Z4 385 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 RABGGTBP53611 331 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 SV2CQ496J9 727 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 FAM183BPQ6ZVS7 135 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 ZNF598Q86UK7 904 aaKnown RBP14.33□□□□□ -0.12
CDC42-202ENST00000344548 UNC93AQ86WB7 457 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 CRYBG2Q8N1P7 616 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 HASPINQ8TF76 798 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 KHSRPQ92945 711 aaKnown RBP eCLIP14.33□□□□□ -0.122e-7■■□□□ 12.6
CDC42-202ENST00000344548 MCRS1Q96EZ8 462 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 HEMGNQ9BXL5 484 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 SYNCQ9H7C4 482 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 RSAD1Q9HA92 442 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 GDF3Q9NR23 364 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 SAGE1Q9NXZ1 904 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 FAM53CQ9NYF3 392 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 IP6K2Q9UHH9 426 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 PHF24Q9UPV7 400 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 TET1Q8NFU7 2136 aa14.33□□□□□ -0.12
CDC42-202ENST00000344548 CLDN5O00501 218 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 PODXLO00592 558 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 ITGB1P05556 798 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 FAM153BP0C7A2 387 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 IL1R2P27930 398 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 PNPLA4P41247 253 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 PLA2G4AP47712 749 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 CDK7P50613 346 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 UPP1Q16831 310 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 FAM153CQ494X1 144 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 PPP1R2P3Q6NXS1 205 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 PAQR9Q6ZVX9 377 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 ECHDC2Q86YB7 292 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 SCUBE3Q8IX30 993 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 SLC2A14Q8TDB8 520 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 CLEC4CQ8WTT0 213 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 SENP8Q96LD8 212 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 TRIM51Q9BSJ1 452 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 PCDH10Q9P2E7 1040 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 FAM153AQ9UHL3 310 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 KIAA1257Q9ULG3 409 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 CCDC188H7C350 402 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 HUS1O60921 280 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 BEST1O76090 585 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 KCNJ1P48048 391 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 ZNF268Q14587 947 aaPredicted RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 TCTN1Q2MV58 587 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 TIGD5Q53EQ6 642 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 GLE1Q53GS7 698 aaKnown RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 MTERF4Q7Z6M4 381 aaKnown RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 TTC39CQ8N584 583 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 AENQ8WTP8 325 aaKnown RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 TSPAN18Q96SJ8 248 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 FAM118BQ9BPY3 351 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 NEUROG2Q9H2A3 272 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 SNX25Q9H3E2 840 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 FAM124BQ9H5Z6 455 aaPredicted RBP14.32□□□□□ -0.12
CDC42-202ENST00000344548 STRIP2Q9ULQ0 834 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 NFU1Q9UMS0 254 aa14.32□□□□□ -0.12
CDC42-202ENST00000344548 BHMG1C9JSJ3 638 aaPredicted RBP14.31□□□□□ -0.12
CDC42-202ENST00000344548 MAP2K7O14733 419 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 GABRDO14764 452 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 LRCH4O75427 683 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 ECHS1P30084 290 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 FLT3P36888 993 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 BRCC3P46736 316 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 FAM102AQ5T9C2 384 aaPredicted RBP14.31□□□□□ -0.12
CDC42-202ENST00000344548 SEL1L2Q5TEA6 688 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 ARHGAP17Q68EM7 881 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 SMYD5Q6GMV2 418 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 RHOT1Q8IXI2 618 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 FAM126BQ8IXS8 530 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 C1orf54Q8WWF1 131 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 IFT81Q8WYA0 676 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 ATG4AQ8WYN0 398 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 SLC4A5Q9BY07 1137 aa14.31□□□□□ -0.12
CDC42-202ENST00000344548 PAK6Q9NQU5 681 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms