RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TMC2Q8TDI7 906 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 KATNAL1Q9BW62 490 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 GTF2IRD1Q9UHL9 959 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 ATP8A1Q9Y2Q0 1164 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 F8VZ95 297 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 UBOX5O94941 541 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 HLA-DRAP01903 254 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 JAM2P57087 298 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 SNX17Q15036 470 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 ADAT2Q7Z6V5 191 aaKnown RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 LMNTD2Q8IXW0 634 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 TRIM51Q9BSJ1 452 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 UPF3AQ9H1J1 476 aaKnown RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 ECT2Q9H8V3 914 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 TNFSF13BQ9Y275 285 aa15.92■□□□□ 0.14
BRAT1-201ENST00000340611 KIAA0100Q14667 2235 aaKnown RBP15.92■□□□□ 0.14
BRAT1-201ENST00000340611 MAPK13O15264 365 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 C4BPAP04003 597 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 NFICP08651 508 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 PIK3CAP42336 1068 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 MPP3Q13368 585 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 CCSAPQ6IQ19 270 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 TMC3Q7Z5M5 1100 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 BRSK2Q8IWQ3 736 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 KLHDC9Q8NEP7 349 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 SYN2Q92777 582 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 GCOM2Q9BZD3 368 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 ADAM22Q9P0K1 906 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 PIN4Q9Y237 131 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 SHBGP04278 402 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 EIF4BP23588 611 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 AKAP5P24588 427 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 GLRA4Q5JXX5 417 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 LHX8Q68G74 356 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 FAM47EQ6ZV65 393 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 PALB2Q86YC2 1186 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 APOBEC3GQ9HC16 384 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 KLK14Q9P0G3 267 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 NKX1-2Q9UD57 310 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 SLC12A4Q9UP95 1085 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 TLDC2A0PJX2 215 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 C5orf60A6NFR6 353 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 LDHAP00338 332 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 DARSP14868 501 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 RNASELQ05823 741 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 CETN1Q12798 172 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 NFX1Q12986 1120 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 ZACNQ401N2 412 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 AGBL2Q5U5Z8 902 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 SLC20A1Q8WUM9 679 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 ZFAND2BQ8WV99 257 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 CHMP6Q96FZ7 201 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 SELENOSQ9BQE4 189 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 NFKBIZQ9BYH8 718 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 UNC93B1Q9H1C4 597 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 NXF3Q9H4D5 531 aaKnown RBP15.91■□□□□ 0.14
BRAT1-201ENST00000340611 SNTG2Q9NY99 539 aa15.91■□□□□ 0.14
BRAT1-201ENST00000340611 CITO14578 2027 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 SMAPO00193 183 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 VIMP08670 466 aaKnown RBP15.9■□□□□ 0.14
BRAT1-201ENST00000340611 FUT4P22083 530 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 PAX3P23760 479 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 ACLYP53396 1101 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 PEX26Q7Z412 305 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 PBKQ96KB5 322 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 LBHD1Q9BQE6 289 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-201ENST00000340611 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.9■□□□□ 0.148e-8■■□□□ 14.3
BRAT1-201ENST00000340611 RNF39Q9H2S5 420 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 KIAA1586Q9HCI6 787 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 SEPT11Q9NVA2 429 aaKnown RBP15.9■□□□□ 0.14
BRAT1-201ENST00000340611 NR2E1Q9Y466 385 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 CDY2AQ9Y6F7 541 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 H0Y3Z8 333 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 KRT19P08727 400 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 SLC10A6Q3KNW5 377 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 C15orf39Q6ZRI6 1047 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 TRPM8Q7Z2W7 1104 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 LRRC57Q8N9N7 239 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 ACTRT1Q8TDG2 376 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 HELQQ8TDG4 1101 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 XPO6Q96QU8 1125 aaKnown RBP15.9■□□□□ 0.14
BRAT1-201ENST00000340611 CGRRF1Q99675 332 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 BEGAINQ9BUH8 593 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 TRPV6Q9H1D0 765 aa15.9■□□□□ 0.14
BRAT1-201ENST00000340611 HMX1Q9NP08 348 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-201ENST00000340611 CYP26A1O43174 497 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 SP100P23497 879 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-201ENST00000340611 THPOP40225 353 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 IFNAR2P48551 515 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 MYL6P60660 151 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 ATP11AP98196 1134 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 MTMR3Q13615 1198 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 JADE1Q6IE81 842 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 ALKBH5Q6P6C2 394 aaKnown RBP15.89■□□□□ 0.13
BRAT1-201ENST00000340611 SCARA5Q6ZMJ2 495 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 ZNF410Q86VK4 478 aa15.89■□□□□ 0.13
BRAT1-201ENST00000340611 IFNLR1Q8IU57 520 aaPredicted RBP15.89■□□□□ 0.13
BRAT1-201ENST00000340611 UHMK1Q8TAS1 419 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms