RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PI4K2AQ9BTU6 479 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 OSBPL6Q9BZF3 934 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 XYLT2Q9H1B5 865 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 TMLHEQ9NVH6 421 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 EHD2Q9NZN4 543 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 METRNQ9UJH8 293 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 GTF3C4Q9UKN8 822 aa14.26□□□□□ -0.13
SIRPB3P-201ENST00000340424 C4BPAP04003 597 aaKnown RBP14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 PSMC2P35998 433 aaKnown RBP14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 MAGEA9P43362 315 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 CASP4P49662 377 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 TCF15Q12870 199 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 NCOA4Q13772 614 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 SGSM1Q2NKQ1 1148 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZNF699Q32M78 642 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZACNQ401N2 412 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 SLC44A4Q53GD3 710 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZNF667Q5HYK9 610 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 TDRD10Q5VZ19 366 aaKnown RBP14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 SCARA3Q6AZY7 606 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 CCDC105Q8IYK2 499 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 MYCBPAPQ8TBZ2 947 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 PLEKHO2Q8TD55 490 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 MSANTD3Q96H12 275 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 NELL2Q99435 816 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 TASP1Q9H6P5 420 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 BRD9Q9H8M2 597 aa14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZNF334Q9HCZ1 680 aaPredicted RBP14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 MAGEC2Q9UBF1 373 aaPredicted RBP14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 NUP210Q8TEM1 1887 aaPredicted RBP14.25□□□□□ -0.13
SIRPB3P-201ENST00000340424 KANSL1LA0AUZ9 987 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 MYBPHLA2RUH7 354 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 TRIM66O15016 1216 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 NOL4O94818 638 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 KRT13P13646 458 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 GLULP15104 373 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 HMGA1P17096 107 aaKnown RBP14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 GJA1P17302 382 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 CYP2F1P24903 491 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 MLLT6P55198 1093 aaPredicted RBP14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 MYL6P60660 151 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 FCHO2Q0JRZ9 810 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 ADAM9Q13443 819 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 PNOCQ13519 176 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZCWPW2Q504Y3 356 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 GPR158Q5T848 1215 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZNF658Q5TYW1 1059 aaPredicted RBP14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 C1orf228Q6PIY5 440 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 VITQ6UXI7 678 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 YAF2Q8IY57 180 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 FAM186BQ8IYM0 893 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 ST13P5Q8NFI4 369 aaPredicted RBP14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 PJA1Q8NG27 643 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 OR6B3Q8NGW1 331 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 SPATA20Q8TB22 786 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 GIPC2Q8TF65 315 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 SMARCE1Q969G3 411 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 SPATA17Q96L03 361 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 MYRFLQ96LU7 910 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 MKNK1Q9BUB5 465 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 PLA2G2FQ9BZM2 168 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 IL21Q9HBE4 155 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 NXF1Q9UBU9 619 aaKnown RBP14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 MAPK8IP1Q9UQF2 711 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 MRPS17Q9Y2R5 130 aaKnown RBP14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 SIT1Q9Y3P8 196 aa14.24□□□□□ -0.13
SIRPB3P-201ENST00000340424 HEPACAM2A8MVW5 462 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 MAN2B1O00754 1011 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 NRG2O14511 850 aaPredicted RBP14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 DPYSL4O14531 572 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZNF263O14978 683 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 CHADO15335 359 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 KINO60870 393 aaKnown RBP14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 LMO2P25791 158 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 ANXA13P27216 316 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 GTF2H1P32780 548 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 PPP1R2P41236 205 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 VAMP7P51809 220 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 NLRP12P59046 1061 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 MCCD1P59942 119 aaPredicted RBP14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 ZNF852Q6ZMS4 543 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 ARID3BQ8IVW6 561 aaPredicted RBP14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 DTWD2Q8NBA8 298 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 MRPS31Q92665 395 aaKnown RBP14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 MYLPFQ96A32 169 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 TNIP3Q96KP6 325 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 TSG101Q99816 390 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 MRPL45Q9BRJ2 306 aaKnown RBP14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 IMPG2Q9BZV3 1241 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 ELOVL4Q9GZR5 314 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 CRTAC1Q9NQ79 661 aa14.23□□□□□ -0.13
SIRPB3P-201ENST00000340424 ATP8B3O60423 1300 aa14.22□□□□□ -0.13
SIRPB3P-201ENST00000340424 SLC38A8A6NNN8 435 aa14.22□□□□□ -0.13
SIRPB3P-201ENST00000340424 A8MXQ7 604 aa14.22□□□□□ -0.13
SIRPB3P-201ENST00000340424 CETN3O15182 167 aa14.22□□□□□ -0.13
SIRPB3P-201ENST00000340424 NCAM2O15394 837 aa14.22□□□□□ -0.13
SIRPB3P-201ENST00000340424 PI15O43692 258 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms