RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 FAM163BP0C2L3 166 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 COL6A1P12109 1028 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 ACAT1P24752 427 aaKnown RBP22.39■■□□□ 1.18
VRK2-201ENST00000340157 SLC1A1P43005 524 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 TRIM60Q495X7 471 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 PAN2Q504Q3 1202 aaKnown RBP22.39■■□□□ 1.18
VRK2-201ENST00000340157 CTU1Q7Z7A3 348 aaKnown RBP22.39■■□□□ 1.18
VRK2-201ENST00000340157 B3GALNT2Q8NCR0 500 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 JOSD2Q8TAC2 188 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 SLC35F5Q8WV83 523 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 MCRS1Q96EZ8 462 aa22.39■■□□□ 1.18
VRK2-201ENST00000340157 TIMM13Q9Y5L4 95 aaPredicted RBP22.39■■□□□ 1.18
VRK2-201ENST00000340157 SIGLEC16A6NMB1 481 aa22.39■■□□□ 1.17
VRK2-201ENST00000340157 E5RJQ4 531 aa22.39■■□□□ 1.17
VRK2-201ENST00000340157 I3L4J1 428 aa22.39■■□□□ 1.17
VRK2-201ENST00000340157 ITGB1P05556 798 aa22.39■■□□□ 1.17
VRK2-201ENST00000340157 HSPA8P11142 646 aaKnown RBP22.39■■□□□ 1.17
VRK2-201ENST00000340157 TAS2R40P59535 323 aa22.39■■□□□ 1.17
VRK2-201ENST00000340157 RBM10P98175 930 aaKnown RBP22.39■■□□□ 1.17
VRK2-201ENST00000340157 ZNF268Q14587 947 aaPredicted RBP22.39■■□□□ 1.17
VRK2-201ENST00000340157 UBE2Q2Q8WVN8 375 aa22.39■■□□□ 1.17
VRK2-201ENST00000340157 DDX27Q96GQ7 796 aaKnown RBP22.39■■□□□ 1.17
VRK2-201ENST00000340157 SCLYQ96I15 445 aa22.39■■□□□ 1.17
VRK2-201ENST00000340157 PIK3R2O00459 728 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 ENPP3O14638 875 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 B3GAT3O94766 335 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 DDHD2O94830 711 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 PYGMP11217 842 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 MAN1A1P33908 653 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 RFC1P35251 1148 aaPredicted RBP22.38■■□□□ 1.17
VRK2-201ENST00000340157 RGS7P49802 495 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 PDE4CQ08493 712 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 FBXO46Q6PJ61 603 aaPredicted RBP22.38■■□□□ 1.17
VRK2-201ENST00000340157 GLB1LQ6UWU2 654 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 ZNF280BQ86YH2 543 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 SLC2A14Q8TDB8 520 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 HASPINQ8TF76 798 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 PIWIL1Q96J94 861 aaKnown RBP22.38■■□□□ 1.17
VRK2-201ENST00000340157 SYNCQ9H7C4 482 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 ST7Q9NRC1 585 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 IP6K2Q9UHH9 426 aa22.38■■□□□ 1.17
VRK2-201ENST00000340157 FGGP02679 453 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 TCF4P15884 667 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 ADORA2BP29275 332 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 BRCC3P46736 316 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 MRPS25P82663 173 aaKnown RBP22.37■■□□□ 1.17
VRK2-201ENST00000340157 TAP1Q03518 808 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 TLE2Q04725 743 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 DSC1Q08554 894 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 DCUN1D2Q6PH85 259 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 DSTYKQ6XUX3 929 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 ARMC5Q96C12 935 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 TNIP3Q96KP6 325 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 LRRC1Q9BTT6 524 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 AP1M1Q9BXS5 423 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 SLC4A5Q9BY07 1137 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 HIPK3Q9H422 1215 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 METTL5Q9NRN9 209 aaKnown RBP22.37■■□□□ 1.17
VRK2-201ENST00000340157 DDX43Q9NXZ2 648 aaKnown RBP22.37■■□□□ 1.17
VRK2-201ENST00000340157 WDR35Q9P2L0 1181 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 NR2E1Q9Y466 385 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 MICAL3Q7RTP6 2002 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 SETSIPP0DME0 302 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 KRT3P12035 628 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 FAM183BPQ6ZVS7 135 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 PAQR9Q6ZVX9 377 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 FUKQ8N0W3 1084 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 TMEM86AQ8N2M4 240 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 ANKRD52Q8NB46 1076 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 HDAC7Q8WUI4 952 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 CRTAC1Q9NQ79 661 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 TMEM161AQ9NX61 479 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 HESX1Q9UBX0 185 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 RAB21Q9UL25 225 aa22.37■■□□□ 1.17
VRK2-201ENST00000340157 F8VP50 259 aa22.36■■□□□ 1.17
VRK2-201ENST00000340157 PTPN1P18031 435 aaKnown RBP22.36■■□□□ 1.17
VRK2-201ENST00000340157 CCL23P55773 120 aa22.36■■□□□ 1.17
VRK2-201ENST00000340157 NOMO2Q5JPE7 1267 aa22.36■■□□□ 1.17
VRK2-201ENST00000340157 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.36■■□□□ 1.17
VRK2-201ENST00000340157 UROC1Q96N76 676 aa22.36■■□□□ 1.17
VRK2-201ENST00000340157 TOX2Q96NM4 488 aa22.36■■□□□ 1.17
VRK2-201ENST00000340157 RTP3Q9BQQ7 232 aa22.36■■□□□ 1.17
VRK2-201ENST00000340157 TBC1D13Q9NVG8 400 aa22.36■■□□□ 1.17
VRK2-201ENST00000340157 BCAT1P54687 386 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 RWDD2BP57060 319 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 BST2Q10589 180 aaKnown RBP22.35■■□□□ 1.17
VRK2-201ENST00000340157 C1orf53Q5VUE5 145 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 TRNP1Q6NT89 227 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 TMEM110Q86TL2 294 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 CRIPAKQ8N1N5 446 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 EMC1Q8N766 993 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 NIPA2Q8N8Q9 360 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 IPO4Q8TEX9 1081 aaKnown RBP22.35■■□□□ 1.17
VRK2-201ENST00000340157 SEPT8Q92599 483 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 HNRNPABQ99729 332 aaKnown RBP22.35■■□□□ 1.17
VRK2-201ENST00000340157 PPP1R12CQ9BZL4 782 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 USTQ9Y2C2 406 aa22.35■■□□□ 1.17
VRK2-201ENST00000340157 KIAA0100Q14667 2235 aaKnown RBP22.35■■□□□ 1.17
VRK2-201ENST00000340157 M0QZQ0 153 aa22.34■■□□□ 1.17
VRK2-201ENST00000340157 CLDN5O00501 218 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms