RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 UBXN2AP68543 259 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 NFIAQ12857 509 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 NR1H3Q13133 447 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 ZYXQ15942 572 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 PKN2Q16513 984 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 SFT2D3Q587I9 215 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 UTS2BQ765I0 119 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 IQCF2Q8IXL9 164 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 PRELID2Q8N945 189 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 ZFP28Q8NHY6 868 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 DIS3LQ8TF46 1054 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 CLIP3Q96DZ5 547 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 GPATCH1Q9BRR8 931 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 HAUS8Q9BT25 410 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 SYT11Q9BT88 431 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 MANSC1Q9H8J5 431 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 USP29Q9HBJ7 922 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 ATAD3AQ9NVI7 634 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 TTC7AQ9ULT0 858 aaPredicted RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 MTO1Q9Y2Z2 717 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 NAV1Q8NEY1 1877 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 TAF1LQ8IZX4 1826 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 IDO1P14902 403 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 KPNA1P52294 538 aaPredicted RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 DRG2P55039 364 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 PDK4Q16654 411 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 PRR16Q569H4 304 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 ULK2Q8IYT8 1036 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 DDI1Q8WTU0 396 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 DNAJC18Q9H819 358 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 CYLDQ9NQC7 956 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 NINJ2Q9NZG7 142 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 GOLGA8TH3BQL2 631 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 EIF3FO00303 357 aaPredicted RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 BIRC5O15392 142 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 CLDN3O15551 220 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 PEX1O43933 1283 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 TNFAIP8O95379 198 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 IFNB1P01574 187 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 SCNN1DP51172 638 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 ATXN3P54252 364 aaPredicted RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 MARSP56192 900 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 LMNB2Q03252 620 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 PPATQ06203 517 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 METTL21CQ5VZV1 264 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 CYFIP1Q7L576 1253 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 FASTKD5Q7L8L6 764 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 ZC3H3Q8IXZ2 948 aaKnown RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 ATG4AQ8WYN0 398 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 SNX27Q96L92 541 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 TTC25Q96NG3 672 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 CEP44Q9C0F1 390 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 AAASQ9NRG9 546 aa9.72□□□□□ -0.85
RPGR-202ENST00000339363 FBXO9Q9UK97 447 aaPredicted RBP9.72□□□□□ -0.85
RPGR-202ENST00000339363 MEIS2O14770 477 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 RAG1P15918 1043 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 TKTP29401 623 aaKnown RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 GRIA2P42262 883 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 PTGIRP43119 386 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 EFHC1Q5JVL4 640 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 NSMFQ6X4W1 530 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 HEMGNQ9BXL5 484 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 GID8Q9NWU2 228 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 POLLQ9UGP5 575 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 RSL24D1Q9UHA3 163 aaKnown RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 ATF5Q9Y2D1 282 aaPredicted RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 ABCB11O95342 1321 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 CCDC195A0A1B0GUA6 201 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 MIF4GDA9UHW6 222 aaKnown RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 FOXN3O00409 490 aaPredicted RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 ITIH2P19823 946 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 SLC5A3P53794 718 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 NUP107P57740 925 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 MTM1Q13496 603 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 SLC1A5Q15758 541 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 PLEKHA7Q6IQ23 1121 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 NET1Q7Z628 596 aaPredicted RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 CLVS1Q8IUQ0 354 aaPredicted RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 PEX5LQ8IYB4 626 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 PROM2Q8N271 834 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 CERS5Q8N5B7 392 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 RBM15BQ8NDT2 890 aaKnown RBP9.71□□□□□ -0.85
RPGR-202ENST00000339363 SH3GL1Q99961 368 aa9.71□□□□□ -0.85
RPGR-202ENST00000339363 COL6A2P12110 1019 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 NELFEP18615 380 aaKnown RBP9.71□□□□□ -0.86
RPGR-202ENST00000339363 PPARGP37231 505 aaPredicted RBP9.71□□□□□ -0.86
RPGR-202ENST00000339363 DRAP1Q14919 205 aaPredicted RBP9.71□□□□□ -0.86
RPGR-202ENST00000339363 TMEM63BQ5T3F8 832 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 IZUMO3Q5VZ72 239 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 EFCAB3Q8N7B9 438 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 GRK7Q8WTQ7 553 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 CCDC68Q9H2F9 335 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 C12orf65Q9H3J6 166 aaKnown RBP9.71□□□□□ -0.86
RPGR-202ENST00000339363 ATP11BQ9Y2G3 1177 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 NEU2Q9Y3R4 380 aa9.71□□□□□ -0.86
RPGR-202ENST00000339363 TMEM150BA6NC51 233 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms