RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GGA2Q9UJY4 613 aa13.69□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GOLGA8SH3BPF8 625 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TRPA1O75762 1119 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 KRT19P08727 400 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CD19P15391 556 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 LACTBP83111 547 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 VSTM1Q6UX27 236 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CYP4V2Q6ZWL3 525 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 POLNQ7Z5Q5 900 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 EMC1Q8N766 993 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 FNIP1Q8TF40 1166 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PTPN18Q99952 460 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 COL1A2P08123 1366 aa13.68□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PDHXO00330 501 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ATF7P17544 494 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GPD2P43304 727 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GABRB2P47870 512 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 INCA1Q0VD86 236 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CNGA2Q16280 664 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SPRED3Q2MJR0 410 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 RAB6CQ53S08 254 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 B4GALNT4Q76KP1 1039 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CYP4X1Q8N118 509 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ZCCHC9Q8N567 271 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CCDC89Q8N998 374 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 MCRS1Q96EZ8 462 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SERPINB12Q96P63 405 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 RAB6CQ9H0N0 254 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ASB7Q9H672 318 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CCDC134Q9H6E4 229 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 RNF186Q9NXI6 227 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 MORF4L1Q9UBU8 362 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 AKT3Q9Y243 479 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 DRG1Q9Y295 367 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 NME7Q9Y5B8 376 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 DNALI1O14645 258 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 MAGEB2O15479 319 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CPP00450 1065 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PFKMP08237 780 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CD48P09326 243 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SMPD1P17405 629 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GCAP28676 217 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 MPP2Q14168 576 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TAF5Q15542 800 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 P3H1Q32P28 736 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TFDP3Q5H9I0 405 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ZNF365Q70YC5 407 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CROCCP2Q86T23 111 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 HAUS1Q96CS2 278 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TMEM176AQ96HP8 235 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SELENOSQ9BQE4 189 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CYP3A43Q9HB55 503 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 METTL5Q9NRN9 209 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 LGALS13Q9UHV8 139 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 STRIP2Q9ULQ0 834 aa13.67□□□□□ -0.22
CDK5RAP1-201ENST00000339269 A0A1B0GUA9 196 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 LRRD1A4D1F6 860 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TJP3O95049 919 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 KRT3P12035 628 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PSMA2P25787 234 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 FASTKD3Q14CZ7 662 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SMTNL2Q2TAL5 461 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 YTHDF3Q7Z739 585 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TADA2BQ86TJ2 420 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GTF3C2Q8WUA4 911 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PIWIL1Q96J94 861 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SEC16BQ96JE7 1060 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PEBP4Q96S96 227 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 DDX56Q9NY93 547 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SAE1Q9UBE0 346 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PNMA3Q9UL41 463 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SLC45A1Q9Y2W3 748 aa13.66□□□□□ -0.22
CDK5RAP1-201ENST00000339269 A0A087WUV0 522 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PPEF2O14830 753 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 MED7O43513 233 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 STAU1O95793 577 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ITGAVP06756 1048 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 MMP3P08254 477 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 HOXA11P31270 313 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ATICP31939 592 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GDF10P55107 478 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TMEM132DQ14C87 1099 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GRIK4Q16099 956 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 KCNT1Q5JUK3 1230 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 RNASEH2BQ5TBB1 312 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CHMP6Q96FZ7 201 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms