RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 VNN2O95498 520 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 POU2F2P09086 479 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 HAPLN1P10915 354 aaPredicted RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 VDRP11473 427 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 MAGEA11P43364 429 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 ALDH1A3P47895 512 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 KLK7P49862 253 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 ZNF132P52740 706 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 BPIFB4P59827 614 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 POLR2FP61218 127 aaKnown RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 RPL10AP62906 217 aaKnown RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 TFF2Q03403 129 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 ITIH3Q06033 890 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 DRAP1Q14919 205 aaPredicted RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 FIGNQ5HY92 759 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 PPM1LQ5SGD2 360 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 RBBP8NLQ8NC74 664 aaPredicted RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 SLC7A14Q8TBB6 771 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 EDEM3Q9BZQ6 932 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 XPO4Q9C0E2 1151 aaKnown RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 UBE2ZQ9H832 354 aaPredicted RBP16.34■□□□□ 0.21
SEC13-201ENST00000337354 SLC27A5Q9Y2P5 690 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 FHOD1Q9Y613 1164 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 ATP8B3O60423 1300 aa16.34■□□□□ 0.21
SEC13-201ENST00000337354 TCF20Q9UGU0 1960 aaKnown RBP16.33■□□□□ 0.2
SEC13-201ENST00000337354 RNF225M0QZC1 329 aaPredicted RBP16.33■□□□□ 0.2
SEC13-201ENST00000337354 FOXN3O00409 490 aaPredicted RBP16.33■□□□□ 0.2
SEC13-201ENST00000337354 LRG1P02750 347 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 KRT5P13647 590 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 LTBRP36941 435 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 PBX1P40424 430 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 RBM10P98175 930 aaKnown RBP16.33■□□□□ 0.2
SEC13-201ENST00000337354 PLCB2Q00722 1185 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 RAPGEF1Q13905 1077 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 STILQ15468 1287 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 AAK1Q2M2I8 961 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 MGAT5BQ3V5L5 792 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 FMNL3Q8IVF7 1028 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 FAM71AQ8IYT1 594 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 C12orf29Q8N999 325 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 MSLNLQ96KJ4 702 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 SPAG5Q96R06 1193 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 B3GNT5Q9BYG0 378 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 INSL5Q9Y5Q6 135 aa16.33■□□□□ 0.2
SEC13-201ENST00000337354 CCDC195A0A1B0GUA6 201 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 XYLBO75191 536 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 TBX10O75333 385 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 KCNA5P22460 613 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 BDNFP23560 247 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
SEC13-201ENST00000337354 PTK2Q05397 1052 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 DLX2Q07687 328 aaPredicted RBP16.32■□□□□ 0.2
SEC13-201ENST00000337354 ORC1Q13415 861 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 CNGA2Q16280 664 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 SYCE2Q6PIF2 218 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 PAQR9Q6ZVX9 377 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 FUKQ8N0W3 1084 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 SLC2A14Q8TDB8 520 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 ATXN2LQ8WWM7 1075 aaKnown RBP16.32■□□□□ 0.2
SEC13-201ENST00000337354 SEPT5Q99719 369 aaPredicted RBP16.32■□□□□ 0.2
SEC13-201ENST00000337354 MED10Q9BTT4 135 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 PRKD2Q9BZL6 878 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 TRIM5Q9C035 493 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 ADAM7Q9H2U9 754 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 CRISPLD1Q9H336 500 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 MYO6Q9UM54 1294 aa16.32■□□□□ 0.2
SEC13-201ENST00000337354 ITIH6Q6UXX5 1313 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 F8VZ95 297 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 TRIM66O15016 1216 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 EPHB6O15197 1021 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 CD19P15391 556 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 CYP2F1P24903 491 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 GRIK1P39086 918 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 USP8P40818 1118 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 STAT1P42224 750 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 EPHB3P54753 998 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 SLC8A3P57103 927 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 PPP1R26Q5T8A7 1209 aaPredicted RBP16.31■□□□□ 0.2
SEC13-201ENST00000337354 CES5AQ6NT32 575 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 ITIH5Q86UX2 942 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 ELMOD1Q8N336 334 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 SMARCD1Q96GM5 515 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 C8orf48Q96LL4 319 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 ZNF512Q96ME7 567 aaPredicted RBP16.31■□□□□ 0.2
SEC13-201ENST00000337354 LPIN3Q9BQK8 851 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 GPR88Q9GZN0 384 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 S1PR5Q9H228 398 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 NLRC4Q9NPP4 1024 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
SEC13-201ENST00000337354 YIPF1Q9Y548 306 aa16.31■□□□□ 0.2
SEC13-201ENST00000337354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■□□□□ 8.8
SEC13-201ENST00000337354 MED7O43513 233 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 RFPL2O75678 378 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 CCDC172P0C7W6 258 aa16.3■□□□□ 0.2
SEC13-201ENST00000337354 CCDC130P13994 396 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms