RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SCOCQ9UIL1 159 aa12.41□□□□□ -0.42
HDAC6-201ENST00000334136 GNEQ9Y223 722 aaKnown RBP12.41□□□□□ -0.42
HDAC6-201ENST00000334136 UCHL3P15374 230 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 GNA15P30679 374 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 BIRC2Q13490 618 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 PARD3BQ8TEW8 1205 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 TGS1Q96RS0 853 aaKnown RBP12.4□□□□□ -0.42
HDAC6-201ENST00000334136 RNF19AQ9NV58 838 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 FTLP02792 175 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-201ENST00000334136 FAM153BP0C7A2 387 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 GTF2H1P32780 548 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 SERPINB6P35237 376 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 RWDD2BP57060 319 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 BYSLQ13895 437 aaKnown RBP12.4□□□□□ -0.42
HDAC6-201ENST00000334136 MAP7D1Q3KQU3 841 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 PPP1R2P3Q6NXS1 205 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 RFX8Q6ZV50 586 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 ERICH1Q86X53 443 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 TRIM59Q8IWR1 403 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 CCHCR1Q8TD31 782 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
HDAC6-201ENST00000334136 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 FAM105AQ9NUU6 356 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 FAM153AQ9UHL3 310 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 PDE4DIPQ5VU43 2346 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 RAD23BP54727 409 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 GALCP54803 685 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 TSEN2Q8NCE0 465 aaKnown RBP12.4□□□□□ -0.42
HDAC6-201ENST00000334136 ARMC2Q8NEN0 867 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 TAS1R2Q8TE23 839 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 PPP2R3CQ969Q6 453 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 ERGIC2Q96RQ1 377 aa12.4□□□□□ -0.42
HDAC6-201ENST00000334136 SKAP2O75563 359 aaPredicted RBP12.4□□□□□ -0.43
HDAC6-201ENST00000334136 SYF2O95926 243 aaKnown RBP12.4□□□□□ -0.43
HDAC6-201ENST00000334136 ATP4AP20648 1035 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 PCSK1P29120 753 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 ADORA2BP29275 332 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 CYP2C18P33260 490 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 PHBP35232 272 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 ARL1P40616 181 aaPredicted RBP12.4□□□□□ -0.43
HDAC6-201ENST00000334136 KCNJ1P48048 391 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 LGSNQ5TDP6 509 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 PASD1Q8IV76 773 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 CEP120Q8N960 986 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 HIPK4Q8NE63 616 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 SPATA20Q8TB22 786 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 LRRC37BQ96QE4 947 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 OSBPL1AQ9BXW6 950 aa12.4□□□□□ -0.43
HDAC6-201ENST00000334136 DICER1Q9UPY3 1922 aaKnown RBP12.4□□□□□ -0.43
HDAC6-201ENST00000334136 MAPK13O15264 365 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 CYP26A1O43174 497 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SPAG7O75391 227 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 RNF8O76064 485 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 LONRF1Q17RB8 773 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 RHOT2Q8IXI1 618 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 DAW1Q8N136 415 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 DBF4BQ8NFT6 615 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 HASPINQ8TF76 798 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 TRIM11Q96F44 468 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 MRPL9Q9BYD2 267 aaKnown RBP12.39□□□□□ -0.43
HDAC6-201ENST00000334136 FGFBP2Q9BYJ0 223 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 STK33Q9BYT3 514 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 FGFR1OP2Q9NVK5 253 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 ANAPC7Q9UJX3 599 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 MAN1A1P33908 653 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SCNN1GP51170 649 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 NSMCE1Q8WV22 266 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 LPPQ93052 612 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SCLYQ96I15 445 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 NTPCRQ9BSD7 190 aaKnown RBP12.39□□□□□ -0.43
HDAC6-201ENST00000334136 IKZF4Q9H2S9 585 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 ZMYND8Q9ULU4 1186 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-201ENST00000334136 MAD1L1Q9Y6D9 718 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SYNJ2BP-COX16A0A087WUM0 186 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 GOLGA8MH3BSY2 632 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 C2CD2LO14523 706 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 TGFB1I1O43294 461 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 INHBAP08476 426 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 ESRRAP11474 423 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SOX5P35711 763 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 MLH1P40692 756 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 MYL6P60660 151 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 COG7P83436 770 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SLC20A2Q08357 652 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SLC29A2Q14542 456 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 BBS9Q3SYG4 887 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 ZNF618Q5T7W0 954 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 NT5C1AQ9BXI3 368 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 SAYSD1Q9NPB0 183 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 COX16Q9P0S2 106 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 ASTN1O14525 1302 aa12.39□□□□□ -0.43
HDAC6-201ENST00000334136 M0QYV0 167 aa12.38□□□□□ -0.43
HDAC6-201ENST00000334136 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
HDAC6-201ENST00000334136 IRX4P78413 519 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms